RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 NPIPB9F8W1W9 429 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 CLDN1O95832 211 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 CRYBB1P53674 252 aaPredicted RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 CTXN1P60606 82 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 CMTM4Q8IZR5 234 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 TMEM217Q8N7C4 229 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 TMEM19Q96HH6 336 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 TEAD3Q99594 435 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 BCO2Q9BYV7 579 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 NME2P1O60361 137 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 DOK2O60496 412 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 IHHQ14623 411 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 MIDNQ504T8 468 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 SLC25A30Q5SVS4 291 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 GRASPQ7Z6J2 395 aaPredicted RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 MISPQ8IVT2 679 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 OR5R1Q8NH85 324 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 TBX15Q96SF7 602 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 LMF2Q9BU23 707 aaKnown RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 FZD9O00144 591 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 FGF18O76093 207 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 MYOGP15173 224 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 ASCL1P50553 236 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 HYAL2Q12891 473 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 NUP43Q8NFH3 380 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 AUP1Q9Y679 476 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 SAP18O00422 153 aaKnown RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 ENPP3O14638 875 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 ERI3O43414 337 aaKnown RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 MMP16P51512 607 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 FAM110BQ8TC76 370 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 LINC00052Q96N35 136 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 GPR20Q99678 358 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 GSTO2Q9H4Y5 243 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 MBNL1Q9NR56 388 aaKnown RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 TIMM13Q9Y5L4 95 aaPredicted RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 hCG_1809904A0A1W2PP81 198 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 A0A1W2PR64 198 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 A0A1W2PRV1 198 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 SOD1P00441 154 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 FKBP2P26885 142 aaKnown RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 TNFRSF9Q07011 255 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 SLC35G1Q2M3R5 365 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 CBARPQ8N350 705 aaPredicted RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 F2RL3Q96RI0 385 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 PHF1O43189 567 aaPredicted RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 ARRDC4Q8NCT1 418 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 OR5AK3PQ8NH89 298 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 WDR76Q9H967 626 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 PWWP2BQ6NUJ5 590 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 CD300LDQ6UXZ3 194 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 APOBEC3GQ9HC16 384 aaKnown RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 FOLR2P14207 255 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 TEAD1P28347 426 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 AMTP48728 403 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 ORAI1Q96D31 301 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 MRPL17Q9NRX2 175 aaKnown RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 ZCWPW2A0A1B0GU75 182 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 SEMA7AO75326 666 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 TACR2P21452 398 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 C1orf127Q8N9H9 656 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 ORAOV1Q8WV07 137 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 ADGRL4Q9HBW9 690 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 ANTXRLA6NF34 631 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 GRXCR1A8MXD5 290 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 GLULP15104 373 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 FXYD4P59646 89 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 CATR1Q13166 79 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 AQP6Q13520 282 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 C9orf135Q5VTT2 229 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 ZNF776Q68DI1 518 aaPredicted RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 PARM1Q6UWI2 310 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 PIM3Q86V86 326 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 NRSN1Q8IZ57 195 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 C19orf47Q8N9M1 422 aaKnown RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 HHIPQ96QV1 700 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 CITED1Q99966 193 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 TXNDC17Q9BRA2 123 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 HMX2A2RU54 273 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 HOXA5P20719 270 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 ATP1B3P54709 279 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 RPS18P62269 152 aaKnown RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 JOSD1Q15040 202 aaPredicted RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 RABEPKQ7Z6M1 372 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 ARL14EPQ8N8R7 260 aaPredicted RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 SLAMF6Q96DU3 332 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 HHIPL1Q96JK4 782 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 DMRTA2Q96SC8 542 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 FGF20Q9NP95 211 aaPredicted RBP6.1□□□□□ -1.43
UBR4-204ENST00000375254 OR5V1Q9UGF6 321 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 ZAR1LA6NP61 321 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 ACP5P13686 325 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 HES1Q14469 280 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 IKZF4Q9H2S9 585 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 LANCL2Q9NS86 450 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 VNN1O95497 513 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 GDF5P43026 501 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 PRLHRP49683 370 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 FAM3AP98173 230 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 TMEM267Q0VDI3 215 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms