RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 FARS2O95363 451 aaKnown RBP12.15□□□□□ -0.46
VAMP4-202ENST00000367740 CHRNGP07510 517 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 FGF4P08620 206 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 MMP7P09237 267 aaPredicted RBP12.15□□□□□ -0.46
VAMP4-202ENST00000367740 CCNOP22674 350 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 APLNRP35414 380 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 CFHR2P36980 270 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 MMP16P51512 607 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 CLDN8P56748 225 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 HOXC5Q00444 222 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 PLP2Q04941 152 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 C5orf46Q6UWT4 87 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 SLC16A14Q7RTX9 510 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 DPPA2Q7Z7J5 298 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 VPS37AQ8NEZ2 397 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 MZB1Q8WU39 189 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 NEIL1Q96FI4 390 aaPredicted RBP12.15□□□□□ -0.46
VAMP4-202ENST00000367740 PLEKHA8Q96JA3 519 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 TBX15Q96SF7 602 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 TMEM165Q9HC07 324 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 MIOXQ9UGB7 285 aa12.15□□□□□ -0.46
VAMP4-202ENST00000367740 C22orf46C9J442 243 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 P2RY10O00398 339 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 SERPINI2O75830 405 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 ZNF205O95201 554 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 NR2F1P10589 423 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 MMP9P14780 707 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 TNFRSF1AP19438 455 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 BIDP55957 195 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 PUDPQ08623 228 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 MTX3Q5HYI7 312 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 SLC27A4Q6P1M0 643 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 LRFN4Q6PJG9 635 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 NET1Q7Z628 596 aaPredicted RBP12.14□□□□□ -0.47
VAMP4-202ENST00000367740 C10orf82Q8WW14 230 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 ITLN1Q8WWA0 313 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 LRTOMTQ8WZ04 291 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 TRIM15Q9C019 465 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 GLTPQ9NZD2 209 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 FOXJ3Q9UPW0 622 aa12.14□□□□□ -0.47
VAMP4-202ENST00000367740 PRSS51A0A1B0GVH4 220 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 H3BSA7 217 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 CPA3P15088 417 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 STOMP27105 288 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 PITPNBP48739 271 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 PRSS12P56730 875 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 CD69Q07108 199 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 CCDC153Q494R4 210 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 PABPC1L2AQ5JQF8 200 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 Q6ZR03 302 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 C10orf107Q8IVU9 208 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 LRRC34Q8IZ02 419 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 GALNT4Q8N4A0 578 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 SCAIQ8N9R8 606 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 OR8B3Q8NGG8 313 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 AGR3Q8TD06 166 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 POM121L2Q96KW2 1035 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 OR8B2Q96RD0 313 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 RHOXF2Q9BQY4 288 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 TMEM246Q9BRR3 403 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 DPAGT1Q9H3H5 408 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 C12orf10Q9HB07 376 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 KIF17Q9P2E2 1029 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 FBLN5Q9UBX5 448 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 VPREB3Q9UKI3 123 aa12.13□□□□□ -0.47
VAMP4-202ENST00000367740 STAB2Q8WWQ8 2551 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 LOC100509620A0A075B734 347 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 IGHV1-69DA0A0B4J2H0 117 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 ENSAO43768 121 aaKnown RBP12.12□□□□□ -0.47
VAMP4-202ENST00000367740 TIMM8AO60220 97 aaPredicted RBP12.12□□□□□ -0.47
VAMP4-202ENST00000367740 IGHV1-69P01742 117 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 BGLAPP02818 100 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 TNFSF4P23510 183 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 PPP1CBP62140 327 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 HSF2Q03933 536 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 CASP8Q14790 479 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 PCLAFQ15004 111 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 SLC35E4Q6ICL7 350 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 PXKQ7Z7A4 578 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 LYG1Q8N1E2 194 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 CCDC63Q8NA47 563 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 OR2Z1Q8NG97 314 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 ABHD4Q8TB40 342 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 MOGAT1Q96PD6 335 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 FN3KRPQ9HA64 309 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 GCM1Q9NP62 436 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 CLN8Q9UBY8 286 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 IL19Q9UHD0 177 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 SIGLEC9Q9Y336 463 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 USH1CQ9Y6N9 552 aa12.12□□□□□ -0.47
VAMP4-202ENST00000367740 A0A1W2PPM1 405 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 C5orf49A4QMS7 147 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 ZNF879B4DU55 563 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 PHYHO14832 338 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 TOX4O94842 621 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 GABRA5P31644 462 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 TGFBR2P37173 567 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 EFNB2P52799 333 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 PSG7Q13046 419 aa12.11□□□□□ -0.47
VAMP4-202ENST00000367740 ZNF404Q494X3 552 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms