RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 SGPP2Q8IWX5 399 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 FAM169BQ8N8A8 192 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 PLPP7Q8NBV4 271 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 NUP43Q8NFH3 380 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 NUDT10Q8NFP7 164 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 FNDC9Q8TBE3 224 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 SMAP2Q8WU79 429 aaPredicted RBP7.96□□□□□ -1.13
SYNE1-206ENST00000367253 CDK15Q96Q40 435 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 SMOQ99835 787 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 TMPRSS13Q9BYE2 586 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 TTTY10Q9BZA0 68 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF160Q9HCG1 818 aa7.96□□□□□ -1.13
SYNE1-206ENST00000367253 KNL1Q8NG31 2342 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 SLC22A31A6NKX4 558 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 M0R1B8 84 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 CCL22O00626 93 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF749O43361 778 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 MRPS14O60783 128 aaKnown RBP7.96□□□□□ -1.14
SYNE1-206ENST00000367253 SLCO2B1O94956 709 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 PF4P02776 101 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 NID1P14543 1247 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 GGT1P19440 569 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 OMGP23515 440 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 EFNA3P52797 238 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 OR1D5P58170 312 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 RAC1P63000 192 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 DUSP7Q16829 419 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 WDR73Q6P4I2 378 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 MEX3DQ86XN8 651 aaKnown RBP7.96□□□□□ -1.14
SYNE1-206ENST00000367253 VRK3Q8IV63 474 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 MUC15Q8N387 334 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 SLC7A13Q8TCU3 470 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 PSMF1Q92530 271 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 DAZAP1Q96EP5 407 aaKnown RBP7.96□□□□□ -1.14
SYNE1-206ENST00000367253 MVB12AQ96EY5 273 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 SDK1Q7Z5N4 2213 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 TRGV5A0A0B4J1U4 118 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 RNF225M0QZC1 329 aaPredicted RBP7.96□□□□□ -1.14
SYNE1-206ENST00000367253 SEC14L2O76054 403 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 CT45A6P0DMU7 189 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 CT45A5P0DMU8 189 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 CT45A7P0DMV0 189 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 CT45A8P0DMV1 189 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 CT45A9P0DMV2 189 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 DEFA4P12838 97 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 NDUFB7P17568 137 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 CD70P32970 193 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 RPS5P46782 204 aaKnown RBP7.96□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF718Q3SXZ3 478 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 CT45A2Q5DJT8 189 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 CT45A1Q5HYN5 189 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 NCMAPQ5T1S8 102 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 NXNL2Q5VZ03 156 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 CNIH2Q6PI25 160 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 ABI3BPQ7Z7G0 1075 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 CT45A3Q8NHU0 189 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 SLC12A9Q9BXP2 914 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 OR51M1Q9H341 326 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 FBXL17Q9UF56 701 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 ZMIZ1Q9ULJ6 1067 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 LAMA4Q16363 1823 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 TRAV18A0A075B6X5 111 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 ADAP1O75689 374 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 PMP2P02689 132 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 GRPRP30550 384 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 CALCRP30988 508 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 TRA2BP62995 288 aaKnown RBP7.96□□□□□ -1.14
SYNE1-206ENST00000367253 EMX2Q04743 252 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 KCNJ11Q14654 390 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 NRN1LQ496H8 165 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 SPANXN4Q5MJ08 99 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 OR4A47Q6IF82 309 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 STEAP1BQ6NZ63 245 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 OR2T4Q8NH00 348 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 HAVCR2Q8TDQ0 301 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 SLC35F5Q8WV83 523 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 DTD2Q96FN9 168 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF48Q96MX3 618 aaPredicted RBP7.96□□□□□ -1.14
SYNE1-206ENST00000367253 TP53RKQ96S44 253 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 SLCO5A1Q9H2Y9 848 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 MS4A5Q9H3V2 200 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 DPH3P1Q9H4G8 78 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 OR1A1Q9P1Q5 309 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 ENPP5Q9UJA9 477 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF835Q9Y2P0 537 aa7.96□□□□□ -1.14
SYNE1-206ENST00000367253 TRAPPC2LH3BP13 241 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 J3KR12 359 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 SAP18O00422 153 aaKnown RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 LATO43561 262 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 SIX3O95343 332 aaPredicted RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 IGHG1P01857 330 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 RAF1P04049 648 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 ARAFP10398 606 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 LIPCP11150 499 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 GABRR1P24046 479 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 HTR1EP28566 365 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 ACVR1BP36896 505 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 ETV6P41212 452 aa7.95□□□□□ -1.14
SYNE1-206ENST00000367253 TSFMP43897 325 aaKnown RBP7.95□□□□□ -1.14
SYNE1-206ENST00000367253 INCA1Q0VD86 236 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms