RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 NIPAL2Q9H841 368 aa1.9□□□□□ -2.11
RNU4-1-201ENST00000363925 SLC7A8Q9UHI5 535 aa1.9□□□□□ -2.11
RNU4-1-201ENST00000363925 TRMT112Q9UI30 125 aaKnown RBP1.9□□□□□ -2.11
RNU4-1-201ENST00000363925 PEX16Q9Y5Y5 336 aa1.9□□□□□ -2.11
RNU4-1-201ENST00000363925 DOCK8Q8NF50 2099 aa1.9□□□□□ -2.11
RNU4-1-201ENST00000363925 TUBGCP6Q96RT7 1819 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 TMEM223A0PJW6 202 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 UTS2O95399 124 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 C1orf105O95561 183 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 IL4P05112 153 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 ZNF806P0C7X5 589 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 ETS2P15036 469 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 RFX3P48380 749 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 TPMTP51580 245 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 GBX2P52951 348 aaPredicted RBP1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 ESRRGP62508 458 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 IRX3P78415 501 aaPredicted RBP1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 IL24Q13007 206 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 PRSS8Q16651 343 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 CHRFAM7AQ494W8 412 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 H2BFWTQ7Z2G1 175 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 HDDC2Q7Z4H3 204 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 NBPF5PQ86XG9 351 aaPredicted RBP1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 HSD17B11Q8NBQ5 300 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 OR52M1Q8NGK5 317 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 COQ8AQ8NI60 647 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 ABHD3Q8WU67 409 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 TRIM44Q96DX7 344 aaPredicted RBP1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 PIK3IP1Q96FE7 263 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 FOXC2Q99958 501 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 CHAC1Q9BUX1 264 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 ROPN1BQ9BZX4 212 aaPredicted RBP1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 RPP21Q9H633 154 aaKnown RBP1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 C12orf10Q9HB07 376 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 SAMSN1Q9NSI8 373 aaKnown RBP1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 GGA2Q9UJY4 613 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 IKZF2Q9UKS7 526 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 GPR179Q6PRD1 2367 aa1.89□□□□□ -2.11
RNU4-1-201ENST00000363925 ATP10AO60312 1499 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 COL1A2P08123 1366 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 TRAV39A0A0B4J263 110 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 ARHGEF35A5YM69 484 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 RRP8O43159 456 aaKnown RBP1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 CLIC3O95833 236 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 DCNP07585 359 aaKnown RBP1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 POLR2MP0CAP2 368 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 HNMTP50135 292 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 PRMT2P55345 433 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 KCNJ2P63252 427 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 TAF7Q15545 349 aaPredicted RBP1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 THEM4Q5T1C6 240 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 RGS9BPQ6ZS82 235 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 TMEM135Q86UB9 458 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 MYOCDQ8IZQ8 938 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 TEX9Q8N6V9 391 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 TRPV1Q8NER1 839 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 OR4F6Q8NGB9 312 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 RGP1Q92546 391 aaPredicted RBP1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 SLC41A3Q96GZ6 507 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 SERPINB12Q96P63 405 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 PARP12Q9H0J9 701 aaKnown RBP1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 SYNDIG1Q9H7V2 258 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 NT5MQ9NPB1 228 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 SUN2Q9UH99 717 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 PSG8Q9UQ74 426 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 RFNGQ9Y644 331 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 IKBKGQ9Y6K9 419 aa1.88□□□□□ -2.11
RNU4-1-201ENST00000363925 GPATCH8Q9UKJ3 1502 aaKnown RBP1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 ZNF816-ZNF321PA0A0X1KG74 233 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 FOXE1O00358 373 aaPredicted RBP1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 MPZL1O95297 269 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 TMEM50AO95807 157 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 SERPIND1P05546 499 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 CT62P0C5K7 136 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 LINC00869P0C866 280 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 NCF2P19878 526 aaPredicted RBP1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 DTYMKP23919 212 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 VHLP40337 213 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 UBE2HP62256 183 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 PPIL2Q13356 520 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 ZMYND11Q15326 602 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 ZNF77Q15935 545 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 ANKDD1AQ495B1 522 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 Q5W150 140 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 ARL9Q6T311 187 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 PLET1Q6UQ28 207 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 TEX43Q6ZNM6 134 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 ASCL5Q7RTU5 278 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 PDIK1LQ8N165 341 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 LRRC75A-AS1Q8N1F1 130 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 RSPH1Q8WYR4 309 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 C12orf42Q96LP6 360 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 CAMK2N2Q96S95 79 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 ULBP2Q9BZM5 246 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 LRRC40Q9H9A6 602 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 WFDC1Q9HC57 220 aa1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 FBXO6Q9NRD1 293 aaPredicted RBP1.87□□□□□ -2.11
RNU4-1-201ENST00000363925 TMED5Q9Y3A6 229 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms