RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TP53TG5Q9Y2B4 290 aa12.32□□□□□ -0.44
PDLIM5-203ENST00000359265 LIPGQ9Y5X9 500 aa12.32□□□□□ -0.44
PDLIM5-203ENST00000359265 ZNF407Q9C0G0 2248 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 A0A1W2PQL4 384 aaPredicted RBP12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 TVP23AA6NH52 213 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 PHYHO14832 338 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 GABARAPO95166 117 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 IGHG3P01860 377 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 HLA-DQA2P01906 255 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 MT-ND5P03915 603 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 PDGFAP04085 211 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 CD79BP40259 229 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 RGS6P49758 472 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 GLO1Q04760 184 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 SRYQ05066 204 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 FMODQ06828 376 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 CAMK2DQ13557 499 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 SLC17A1Q14916 467 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 TIMM50Q3ZCQ8 353 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 RNFT1Q5M7Z0 435 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 THEM4Q5T1C6 240 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 VASNQ6EMK4 673 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 RPUSD3Q6P087 351 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 LYPD4Q6UWN0 246 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 FCRLAQ7L513 359 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 CHMP1BQ7LBR1 199 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 TIGD4Q8IY51 512 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 RBMXL3Q8N7X1 1067 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 OR6N2Q8NGY6 317 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 MRPL13Q9BYD1 178 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 NAA50Q9GZZ1 169 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 PLEKHB1Q9UF11 243 aaPredicted RBP12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 MCTS1Q9ULC4 181 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 TMEM14AQ9Y6G1 99 aa12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 SPTBN1Q01082 2364 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-203ENST00000359265 H3BMQ9 156 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 CYTIPO60759 359 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 CPEP16870 476 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 CSNK1A1P48729 337 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 TAS2R43P59537 309 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 BDH1Q02338 343 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 ACSM1Q08AH1 577 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 CARD17Q5XLA6 110 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 SLC16A12Q6ZSM3 486 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 CDC20BQ86Y33 519 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 SYS1Q8N2H4 156 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 ZNF485Q8NCK3 441 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 GATAD2BQ8WXI9 593 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 ROBO4Q8WZ75 1007 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 UFD1Q92890 307 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 MARVELD3Q96A59 401 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 NMD3Q96D46 503 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 ZNF845Q96IR2 970 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 WDR76Q9H967 626 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 TRIM36Q9NQ86 728 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 PTTG2Q9NZH5 202 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 RCE1Q9Y256 329 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 FLVCR1Q9Y5Y0 555 aa12.3□□□□□ -0.44
PDLIM5-203ENST00000359265 ARHGAP21Q5T5U3 1957 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 ZNF716A6NP11 495 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 CRYABP02511 175 aaKnown RBP12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 GADD45AP24522 165 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 ENTPD1P49961 510 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 RASGEF1BQ0VAM2 473 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 DOC2BQ14184 412 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 SSX1Q16384 188 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 CDONQ4KMG0 1287 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 FAM220AQ7Z4H9 259 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 KLBQ86Z14 1044 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 WDFY1Q8IWB7 410 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 OR6N1Q8NGY5 312 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 SMAP2Q8WU79 429 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 SNX33Q8WV41 574 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 INTS12Q96CB8 462 aaKnown RBP12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 C4orf36Q96KX1 117 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 ZNF385AQ96PM9 386 aaKnown RBP12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 OR2M2Q96R28 347 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 NDUFB11Q9NX14 153 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 KLHL9Q9P2J3 617 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 SPRR3Q9UBC9 169 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 LAMP5Q9UJQ1 280 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 COPS3Q9UNS2 423 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 COA3Q9Y2R0 106 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 ALPK2Q86TB3 2170 aa12.29□□□□□ -0.44
PDLIM5-203ENST00000359265 A0A1W2PPL8 197 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 J3QLW9 94 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 K7EM74 188 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 GPR171O14626 319 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 SLC22A1O15245 554 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 AIREO43918 545 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 SLC43A1O75387 559 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 HRGP04196 525 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 SPARCP09486 303 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 GAAP10253 952 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 SFTPCP11686 197 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 CPN1P15169 458 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 ZNF823P16415 610 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 ZNF19P17023 458 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 PTGS2P35354 604 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 HCCSP53701 268 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms