RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 SLC25A47Q6Q0C1 308 aa16.08■□□□□ 0.17
SMARCD3-202ENST00000356800 CHMP1BQ7LBR1 199 aa16.08■□□□□ 0.17
SMARCD3-202ENST00000356800 SSX6Q7RTT6 188 aa16.08■□□□□ 0.17
SMARCD3-202ENST00000356800 ADGRE4PQ86SQ3 457 aa16.08■□□□□ 0.17
SMARCD3-202ENST00000356800 PHC2Q8IXK0 858 aa16.08■□□□□ 0.17
SMARCD3-202ENST00000356800 SPRYD4Q8WW59 207 aaPredicted RBP16.08■□□□□ 0.17
SMARCD3-202ENST00000356800 MCHR2Q969V1 340 aa16.08■□□□□ 0.17
SMARCD3-202ENST00000356800 SARAFQ96BY9 339 aa16.08■□□□□ 0.17
SMARCD3-202ENST00000356800 RBP7Q96R05 134 aa16.08■□□□□ 0.17
SMARCD3-202ENST00000356800 NDUFB11Q9NX14 153 aa16.08■□□□□ 0.17
SMARCD3-202ENST00000356800 FOXD3Q9UJU5 478 aaPredicted RBP16.08■□□□□ 0.17
SMARCD3-202ENST00000356800 COPS3Q9UNS2 423 aa16.08■□□□□ 0.17
SMARCD3-202ENST00000356800 RCE1Q9Y256 329 aa16.08■□□□□ 0.17
SMARCD3-202ENST00000356800 CENPBD1B2RD01 187 aa16.08■□□□□ 0.16
SMARCD3-202ENST00000356800 KHDRBS3O75525 346 aaKnown RBP16.08■□□□□ 0.16
SMARCD3-202ENST00000356800 MPZL1O95297 269 aa16.08■□□□□ 0.16
SMARCD3-202ENST00000356800 GADD45AP24522 165 aa16.08■□□□□ 0.16
SMARCD3-202ENST00000356800 AQP6Q13520 282 aa16.08■□□□□ 0.16
SMARCD3-202ENST00000356800 DNM1P34Q6PK57 102 aa16.08■□□□□ 0.16
SMARCD3-202ENST00000356800 NSMAFQ92636 917 aa16.08■□□□□ 0.16
SMARCD3-202ENST00000356800 GPR137Q96N19 417 aa16.08■□□□□ 0.16
SMARCD3-202ENST00000356800 MYCBPQ99417 103 aaPredicted RBP16.08■□□□□ 0.16
SMARCD3-202ENST00000356800 MNTQ99583 582 aa16.08■□□□□ 0.16
SMARCD3-202ENST00000356800 PRRG4Q9BZD6 226 aa16.08■□□□□ 0.16
SMARCD3-202ENST00000356800 BABAM2Q9NXR7 383 aa16.08■□□□□ 0.16
SMARCD3-202ENST00000356800 GLTPQ9NZD2 209 aa16.08■□□□□ 0.16
SMARCD3-202ENST00000356800 TLN1Q9Y490 2541 aaKnown RBP16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 AIREO43918 545 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 MT-ND5P03915 603 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 QDPRP09417 244 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 GAAP10253 952 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 NR4A1P22736 598 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 CSNK1A1P48729 337 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 ACTA2P62736 377 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 ACTG2P63267 376 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 NFATC3Q12968 1075 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 FAM180AQ6UWF9 173 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 AAED1Q7RTV5 226 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 EGFL6Q8IUX8 553 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 C20orf196Q8IYI0 205 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 SYS1Q8N2H4 156 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 SLC26A10Q8NG04 563 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 OR5M9Q8NGP3 310 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 RPL3LQ92901 407 aaKnown RBP16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 TMEM45BQ96B21 275 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 ISG20L2Q9H9L3 353 aaKnown RBP16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 BCO1Q9HAY6 547 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 KLHL9Q9P2J3 617 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 CLCF1Q9UBD9 225 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 CLEC4AQ9UMR7 237 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 FREM1Q5H8C1 2179 aa16.07■□□□□ 0.16
SMARCD3-202ENST00000356800 A0A1W2PPW3 197 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 OR14I1A6ND48 311 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 SLC22A20A6NK97 555 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 LALBAP00709 142 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 RPS27P42677 84 aaKnown RBP16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 ZNF133P52736 654 aaPredicted RBP16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 GLO1Q04760 184 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 MEP1BQ16820 701 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 CDONQ4KMG0 1287 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 LIPKQ5VXJ0 399 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 TUSC5Q8IXB3 177 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 CISD2Q8N5K1 135 aaKnown RBP16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 OR6N1Q8NGY5 312 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 FNDC8Q8TC99 324 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 UFD1Q92890 307 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 MRPL48Q96GC5 212 aaKnown RBP16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 INTS14Q96SY0 518 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 TSC22D3Q99576 134 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 KLHDC2Q9Y2U9 406 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 ZNF175Q9Y473 711 aa16.06■□□□□ 0.16
SMARCD3-202ENST00000356800 ARHGAP21Q5T5U3 1957 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 GPR171O14626 319 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 HLA-DQA2P01906 255 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 EDNRAP25101 427 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 PSMA1P25786 263 aaKnown RBP16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 SH3BGRP55822 239 aaPredicted RBP16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 GPR50Q13585 617 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 SPCS2Q15005 226 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 RNPS1Q15287 305 aaKnown RBP16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 GDPGP1Q6ZNW5 385 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 CDC20BQ86Y33 519 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 OR6N2Q8NGY6 317 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 TTTY10Q9BZA0 68 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 OR51E2Q9H255 320 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 RNF122Q9H9V4 155 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 TRIM36Q9NQ86 728 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 ZMIZ1Q9ULJ6 1067 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 UGT2A1Q9Y4X1 527 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 DOCK7Q96N67 2140 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 ZNF724A8MTY0 619 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 PRR32B1ATL7 298 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 ZNF670-ZNF695F2Z2N8 137 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 UPK3AO75631 287 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 TAS2R43P59537 309 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 VBP1P61758 197 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 C10orf128Q5T292 105 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 VASH1Q7L8A9 365 aaPredicted RBP16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 DPY19L4Q7Z388 723 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms