RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 FAM171A2A8MVW0 826 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 BHLHE40O14503 412 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 IMPA2O14732 288 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 CTSBP07858 339 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 THEGLP0DJG4 465 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 HOXB2P14652 356 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 IL9P15248 144 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 COL9A1P20849 921 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 NME2P22392 152 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 MMP15P51511 669 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 GPR143P51810 404 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 PNLIPRP2P54317 469 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 PCGF3Q3KNV8 242 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 EIPR1Q53HC9 387 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 ZNF626Q68DY1 528 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 ETFRF1Q6IPR1 90 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 GID4Q8IVV7 300 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 OR2L13Q8N349 312 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 FAM24BQ8N5W8 94 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 EIF4E3Q8N5X7 224 aaKnown RBP8.53□□□□□ -1.04
SMG6-202ENST00000354901 FAM98AQ8NCA5 519 aaKnown RBP8.53□□□□□ -1.04
SMG6-202ENST00000354901 OR10D4PQ8NGN7 298 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 ABHD4Q8TB40 342 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 SMIM4Q8WVI0 70 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 MAFIPQ8WZ33 124 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 FAM3CQ92520 227 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 ARL11Q969Q4 196 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 PNPLA2Q96AD5 504 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 MARS2Q96GW9 593 aaKnown RBP8.53□□□□□ -1.04
SMG6-202ENST00000354901 TMEM41AQ96HV5 264 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 OR2A5Q96R48 311 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 TIMP4Q99727 224 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 KIR3DX1Q9H7L2 352 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 KLHL9Q9P2J3 617 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 FBXO4Q9UKT5 387 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 ATG2AQ2TAZ0 1938 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 A0A087X0M5 115 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 A0A1B0GX30 115 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 LINC01565O15544 149 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 HCRTR1O43613 425 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 MT-ND5P03915 603 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 AVPR2P30518 371 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 PSMB10P40306 273 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 TRAM1Q15629 374 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 MICBQ29980 383 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 ITPRIPL2Q3MIP1 535 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 ABHD13Q7L211 337 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 PPP1R3BQ86XI6 285 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 SLC44A3Q8N4M1 653 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 OR52E2Q8NGJ4 325 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 GHSRQ92847 366 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 RERGQ96A58 199 aaPredicted RBP8.53□□□□□ -1.04
SMG6-202ENST00000354901 SMOC1Q9H4F8 434 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 ASB6Q9NWX5 421 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 NOP16Q9Y3C1 178 aaKnown RBP8.53□□□□□ -1.04
SMG6-202ENST00000354901 PRSS47A8MTI9 375 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 OR10H2O60403 315 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 NID1P14543 1247 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 MPGP29372 298 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 CEBPGP53567 150 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 DUSP8Q13202 625 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 ERV3-1Q14264 604 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 RSU1Q15404 277 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 AMZ1Q400G9 498 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 DGAT2L6Q6ZPD8 337 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 MISPQ8IVT2 679 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 CASTOR1Q8WTX7 329 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 MISP3Q96FF7 219 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 HSPA12BQ96MM6 686 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 SERINC2Q96SA4 455 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 GPR174Q9BXC1 333 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 ZNF350Q9GZX5 532 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 TMEM27Q9HBJ8 222 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 MED17Q9NVC6 651 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 TAS2R5Q9NYW4 299 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 DMRT1Q9Y5R6 373 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 HEATR5AQ86XA9 2040 aa8.53□□□□□ -1.04
SMG6-202ENST00000354901 TMEM82A0PJX8 343 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 ACOD1A6NK06 481 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 EEF1E1-BLOC1S5C9J1V9 151 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 K7EQS6 105 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 GMFGO60234 142 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 RDH16O75452 317 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 RCBTB2O95199 551 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 KLF8O95600 359 aaPredicted RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 SNRPCP09234 159 aaKnown RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 SBK2P0C263 348 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 H2AFB1P0C5Y9 115 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 OR8U8P0C7N1 319 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 NDUFS1P28331 727 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 CD80P33681 288 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 LSSP48449 732 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 OR6K3Q8NGY3 331 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 BRIX1Q8TDN6 353 aaKnown RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 KISS1RQ969F8 398 aaPredicted RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 OR14A2Q96R54 314 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 UBL7Q96S82 380 aaPredicted RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 CCDC3Q9BQI4 270 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 SMCO4Q9NRQ5 59 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 ZMIZ1Q9ULJ6 1067 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms