RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TFECO14948 347 aaPredicted RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 GMDSO60547 372 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CCNB2O95067 398 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 LALBAP00709 142 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CT45A10P0DMU9 189 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CTRB1P17538 263 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CD82P27701 267 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 GTF2A1P52655 376 aaPredicted RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 PSMD4P55036 377 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 ERVK-25P63136 954 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 TGFBR3Q03167 851 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 SERTAD2Q14140 314 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CTRB2Q6GPI1 263 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 Q6ZN92 141 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CCDC50Q8IVM0 306 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF614Q8N883 585 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CCDC26Q8TAB7 109 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 NUS1Q96E22 293 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 VSIG2Q96IQ7 327 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 F2RL3Q96RI0 385 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 TGS1Q96RS0 853 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 UQCC2Q9BRT2 126 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 HES7Q9BYE0 225 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 MFFQ9GZY8 342 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 EML4Q9HC35 981 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 UBAP1Q9NZ09 502 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CCDC18Q5T9S5 1454 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CLTCQ00610 1675 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 GRIN2DO15399 1336 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 SOGA1O94964 1423 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 ARHGAP31Q2M1Z3 1444 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 ANKRD30BQ9BXX2 1392 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 PLEKHG1Q9ULL1 1385 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 TRBV11-1A0A0K0K1C0 115 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 NTN3O00634 580 aaPredicted RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 PI15O43692 258 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 KDELR3O43731 214 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 MYL2P10916 166 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 OR1E1P30953 314 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 RFX3P48380 749 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 GSCP56915 257 aaPredicted RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 TNNC1P63316 161 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CXCL6P80162 114 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CYCSP99999 105 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 IL9RQ01113 521 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 RPEL1Q2QD12 228 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 C9orf135Q5VTT2 229 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF343Q6P1L6 599 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CNIH2Q6PI25 160 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CEACAM19Q7Z692 300 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 LRRTM1Q86UE6 522 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 ZNF547Q8IVP9 402 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 LRRC8AQ8IWT6 810 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 MICU2Q8IYU8 434 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 RDH10Q8IZV5 341 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 C15orf54Q8N8G6 183 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 SPERTQ8NA61 448 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 FBXO36Q8NEA4 188 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 LYPD6BQ8NI32 183 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 NDNFQ8TB73 568 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 FRAT1Q92837 279 aaPredicted RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 LYZL4Q96KX0 146 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 PGLYRP4Q96LB8 373 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 LGMNQ99538 433 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 MEIS3Q99687 375 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 TSG101Q99816 390 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 SLC39A3Q9BRY0 314 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 LY9Q9HBG7 655 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 NANSQ9NR45 359 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 GALPQ9UBC7 116 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 BZW2Q9Y6E2 419 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 DMXL1Q9Y485 3027 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 TMEM94Q12767 1356 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 KANK1Q14678 1352 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 FRYQ5TBA9 3013 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 PLPP1O14494 284 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 AIM2O14862 343 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 UGT1A9O60656 530 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 RD3LP0DJH9 198 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 PRKACAP17612 351 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CSNK2A2P19784 350 aaPredicted RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 UGT1A4P22310 534 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 RORAP35398 523 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 UGT1A3P35503 534 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 GCKP35557 465 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CCNHP51946 323 aaPredicted RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 DGUOKQ16854 277 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 TRMT5Q32P41 509 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 ACOT7LQ6ZUV0 252 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 NELFCDQ8IXH7 590 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 TMEM104Q8NE00 496 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 OR51F2Q8NH61 342 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 CPB2Q96IY4 423 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 NSMCE3Q96MG7 304 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 RIOK1Q9BRS2 568 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 SYT11Q9BT88 431 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 STMN4Q9H169 189 aaPredicted RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 TDRD3Q9H7E2 651 aaKnown RBP1.27□□□□□ -2.21
BRCA1-202ENST00000354071 UGT1A7Q9HAW7 530 aa1.27□□□□□ -2.21
BRCA1-202ENST00000354071 UGT1A8Q9HAW9 530 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms