RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ZNF610Q8N9Z0 462 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 BHLHE23Q8NDY6 225 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 ROBO4Q8WZ75 1007 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 FGF13Q92913 245 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 HIST1H2BHQ93079 126 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 RAB24Q969Q5 203 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 S100A13Q99584 98 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 NKX3-1Q99801 234 aaPredicted RBP12.04□□□□□ -0.48
IFT88-202ENST00000351808 HIST1H2BNQ99877 126 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 HIST1H2BMQ99879 126 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 TWSG1Q9GZX9 223 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 MYOZ1Q9NP98 299 aaPredicted RBP12.04□□□□□ -0.48
IFT88-202ENST00000351808 KLHL28Q9NXS3 571 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 HAO2Q9NYQ3 351 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 PLA2G2EQ9NZK7 142 aa12.04□□□□□ -0.48
IFT88-202ENST00000351808 CDV3Q9UKY7 258 aaKnown RBP12.04□□□□□ -0.48
IFT88-202ENST00000351808 SLC5A10A0PJK1 596 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 GLOD5A6NK44 160 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 ZNF587BE7ETH6 402 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 AK1P00568 194 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 MPZP25189 248 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 IL2RGP31785 369 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 FRKP42685 505 aaPredicted RBP12.03□□□□□ -0.48
IFT88-202ENST00000351808 PPICP45877 212 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 BEX3Q00994 111 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 TGM3Q08188 693 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 C14orf28Q4W4Y0 310 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 ZNF529Q6P280 563 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 NXPE4Q6UWF7 544 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 DLK2Q6UY11 383 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 WDR88Q6ZMY6 472 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 C5orf24Q7Z6I8 188 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 SLC35F2Q8IXU6 374 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 CCDC116Q8IYX3 515 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 LCN9Q8WX39 176 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 SCAMP4Q969E2 229 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 NTNG2Q96CW9 530 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 SLC17A9Q9BYT1 436 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 UBQLN4Q9NRR5 601 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 HDGFL3Q9Y3E1 203 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 UMAD1C9J7I0 102 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 TSPAN6O43657 245 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 RPP14O95059 124 aaKnown RBP12.03□□□□□ -0.48
IFT88-202ENST00000351808 SNAI1O95863 264 aaPredicted RBP12.03□□□□□ -0.48
IFT88-202ENST00000351808 OR2T7P0C7T2 308 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 ZNF735P0CB33 412 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 PBLDP30039 288 aaPredicted RBP12.03□□□□□ -0.48
IFT88-202ENST00000351808 SERPINF1P36955 418 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 DNLZQ5SXM8 178 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 KHDRBS2Q5VWX1 349 aaKnown RBP12.03□□□□□ -0.48
IFT88-202ENST00000351808 CD163Q86VB7 1156 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 OR2L13Q8N349 312 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 OR2T27Q8NH04 317 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 SLC2A12Q8TD20 617 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 GPX8Q8TED1 209 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 WFIKKN2Q8TEU8 576 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 JSRP1Q96MG2 331 aaPredicted RBP12.03□□□□□ -0.48
IFT88-202ENST00000351808 PHB2Q99623 299 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 SLC6A7Q99884 636 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 ADAM19Q9H013 955 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 SLC2A4RGQ9NR83 387 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 DENND4CQ5VZ89 1909 aa12.03□□□□□ -0.48
IFT88-202ENST00000351808 TRAV8-7A0A075B6U6 113 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 TMEM235A6NFC5 223 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 M0QZ92 97 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 TMPRSS11DO60235 418 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 FCMRO60667 390 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 TBX6O95947 436 aaPredicted RBP12.02□□□□□ -0.48
IFT88-202ENST00000351808 GRPRP30550 384 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 CORO1AP31146 461 aaKnown RBP12.02□□□□□ -0.48
IFT88-202ENST00000351808 NCBP2P52298 156 aaKnown RBP eCLIP12.02□□□□□ -0.481e-9■■■□□ 18.2
IFT88-202ENST00000351808 CD81P60033 236 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 HNRNPKP61978 463 aaKnown RBP eCLIP12.02□□□□□ -0.48
IFT88-202ENST00000351808 ARHGAP40Q5TG30 622 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 RPL7L1Q6DKI1 246 aaKnown RBP12.02□□□□□ -0.48
IFT88-202ENST00000351808 TPRG1Q6ZUI0 275 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 KLHDC8AQ8IYD2 350 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 ZNF664Q8N3J9 261 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 NAXEQ8NCW5 288 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 MITD1Q8WV92 249 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 WBP2Q969T9 261 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 GALNT14Q96FL9 552 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 SYT4Q9H2B2 425 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 FAM86C1Q9NVL1 165 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 CLDND1Q9NY35 253 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 AHSPQ9NZD4 102 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 GOLT1BQ9Y3E0 138 aa12.02□□□□□ -0.48
IFT88-202ENST00000351808 ADAM10O14672 748 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 RCBTB2O95199 551 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 FBXO45P0C2W1 286 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 GJA4P35212 333 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 MAS1LP35410 378 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 CD200P41217 278 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 SLC6A9P48067 706 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 ACTBP60709 375 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 ACTG1P63261 375 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 EIF2B1Q14232 305 aaKnown RBP12.02□□□□□ -0.49
IFT88-202ENST00000351808 EBPQ15125 230 aaKnown RBP12.02□□□□□ -0.49
IFT88-202ENST00000351808 DUSP28Q4G0W2 176 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 ZNF227Q86WZ6 799 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms