RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 TSEN54Q7Z6J9 526 aaKnown RBP13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 LRRC75AQ8NAA5 344 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 SLC30A7Q8NEW0 376 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 MS4A3Q96HJ5 214 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 COX4I2Q96KJ9 171 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 TSPAN32Q96QS1 320 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 RAB1BQ9H0U4 201 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 MAGIXQ9H6Y5 334 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 FAM53CQ9NYF3 392 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 GPR160Q9UJ42 338 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 GDF2Q9UK05 429 aaPredicted RBP13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 SIGLEC7Q9Y286 467 aa13.66□□□□□ -0.22
TSPAN4-201ENST00000346501 A0A1W2PPL8 197 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 C12orf71A8MTZ7 269 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 GYG2O15488 501 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 SEMG1P04279 462 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 TP53P04637 393 aaPredicted RBP13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 PATE4P0C8F1 98 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 HOXB6P17509 224 aaKnown RBP13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 FUT4P22083 530 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 NOS3P29474 1203 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 SDHAP31040 664 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 SLC6A6P31641 620 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 RAD52P43351 418 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 HGFACQ04756 655 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 FMODQ06828 376 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 TNK1Q13470 666 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 SWI5Q1ZZU3 235 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 LCN8Q6JVE9 175 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 DNM1P34Q6PK57 102 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 SLC25A47Q6Q0C1 308 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 SMARCD3Q6STE5 483 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 DPY19L2P2Q6ZN68 376 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 ADCK1Q86TW2 530 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 ZNF519Q8TB69 540 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 GNPDA2Q8TDQ7 276 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 ASB9Q96DX5 294 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 WACQ9BTA9 647 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 THTPAQ9BU02 230 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 MYOZ1Q9NP98 299 aaPredicted RBP13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 ZNF224Q9NZL3 707 aa13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 EIF3KQ9UBQ5 218 aaKnown RBP13.65□□□□□ -0.22
TSPAN4-201ENST00000346501 TNFRSF11BO00300 401 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 NDUFS7O75251 213 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 F12P00748 615 aaPredicted RBP13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 ZNF35P13682 527 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 MSR1P21757 451 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 CDAP32320 146 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 GLRXP35754 106 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 LIMS1P48059 325 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 PPOXP50336 477 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 KRR1Q13601 381 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 SEC23BQ15437 767 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 FAM27BQ5VT28 67 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 RPL13AP3Q6NVV1 102 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 MYPOPQ86VE0 399 aaPredicted RBP13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 JAZF1Q86VZ6 243 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 OR52L1Q8NGH7 329 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 FANK1Q8TC84 345 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 FAM168AQ92567 244 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 CCDC124Q96CT7 223 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 Q96M85 177 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 GPX7Q96SL4 187 aaPredicted RBP13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 BCL2L14Q9BZR8 327 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 RERGLQ9H628 205 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 NRIP3Q9NQ35 241 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 TAS2R1Q9NYW7 299 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 ADAM18Q9Y3Q7 739 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 TIMM10BQ9Y5J6 103 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 IER3IP1Q9Y5U9 82 aa13.64□□□□□ -0.23
TSPAN4-201ENST00000346501 TEX13CA0A0J9YWL9 993 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 PRSS37A4D1T9 235 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 PTP4A3O75365 173 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 CST2P09228 141 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 T-ENOLP0DO92 83 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 APEHP13798 732 aaKnown RBP13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 ATP6V1B2P21281 511 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 CCNOP22674 350 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 FPR3P25089 353 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 CRABP1P29762 137 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 EVX1P49640 407 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 GDI2P50395 445 aaKnown RBP13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 RASSF2P50749 326 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 TRAP1Q12931 704 aaKnown RBP13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 MOGQ16653 247 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 RGS7BPQ6MZT1 257 aaPredicted RBP13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 ARL9Q6T311 187 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 SVOPLQ8N434 492 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 C11orf40Q8WZ69 217 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 NMD3Q96D46 503 aaKnown RBP13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 ZNF75AQ96N20 296 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 ERMAPQ96PL5 475 aaPredicted RBP13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 REG4Q9BYZ8 158 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 MS4A5Q9H3V2 200 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 REEP1Q9H902 201 aa13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 FLNAP21333 2647 aaKnown RBP13.63□□□□□ -0.23
TSPAN4-201ENST00000346501 ACANP16112 2415 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 RNF223E7ERA6 249 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 SOCS2O14508 198 aa13.62□□□□□ -0.23
TSPAN4-201ENST00000346501 KHDRBS3O75525 346 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms