RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 FREM3P0C091 2139 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 PTTG1IPP53801 180 aa17.9■□□□□ 0.46
HDAC4-201ENST00000345617 RPUSD3Q6P087 351 aaKnown RBP17.9■□□□□ 0.46
HDAC4-201ENST00000345617 A6NCN8 305 aa17.89■□□□□ 0.46
HDAC4-201ENST00000345617 XRCC3O43542 346 aa17.89■□□□□ 0.46
HDAC4-201ENST00000345617 SLC11A1P49279 550 aa17.89■□□□□ 0.46
HDAC4-201ENST00000345617 HSF1Q00613 529 aa17.89■□□□□ 0.46
HDAC4-201ENST00000345617 TMEM174Q8WUU8 243 aa17.89■□□□□ 0.46
HDAC4-201ENST00000345617 CLDN20P56880 219 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 TOR2AQ5JU69 321 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 FAM180BQ6P0A1 224 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 ZNF836Q6ZNA1 936 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 DCTN6O00399 190 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 RAD1O60671 282 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 CSNK1DP48730 415 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 ISL2Q96A47 359 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 ARHGDIGQ99819 225 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 ULBP2Q9BZM5 246 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 KDM4EB2RXH2 506 aaPredicted RBP17.89■□□□□ 0.45
HDAC4-201ENST00000345617 CYC1P08574 325 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 ALDOCP09972 364 aaKnown RBP17.89■□□□□ 0.45
HDAC4-201ENST00000345617 F3P13726 295 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 WNT7BP56706 349 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 SIM1P81133 766 aaPredicted RBP17.89■□□□□ 0.45
HDAC4-201ENST00000345617 CORO6Q6QEF8 472 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 CPEB3Q8NE35 698 aaKnown RBP17.89■□□□□ 0.45
HDAC4-201ENST00000345617 BARHL1Q9BZE3 327 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 SLC2A9Q9NRM0 540 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 C7orf72A4D263 438 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 GPR75O95800 540 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 KCNJ10P78508 379 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 PRICKLE2Q7Z3G6 844 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 RPL3LQ92901 407 aaKnown RBP17.89■□□□□ 0.45
HDAC4-201ENST00000345617 PIGCQ92535 297 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 CTRCQ99895 268 aa17.89■□□□□ 0.45
HDAC4-201ENST00000345617 FAM155AB1AL88 458 aaPredicted RBP17.89■□□□□ 0.45
HDAC4-201ENST00000345617 SUSD5O60279 629 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 OR2T2Q6IF00 324 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 ZNF596Q8TC21 504 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 TRIB1Q96RU8 372 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 BOCQ9BWV1 1114 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 ACOD1A6NK06 481 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 TMEM97Q5BJF2 176 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 TIMM29Q9BSF4 260 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 PMP2P02689 132 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 SLC16A14Q7RTX9 510 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 PRSS16Q9NQE7 514 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 ABHD16AO95870 558 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 USF1P22415 310 aaPredicted RBP17.88■□□□□ 0.45
HDAC4-201ENST00000345617 PPP1CBP62140 327 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 SPRED3Q2MJR0 410 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 IL17FQ96PD4 163 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 RIMS4Q9H426 269 aaPredicted RBP17.88■□□□□ 0.45
HDAC4-201ENST00000345617 HEYLQ9NQ87 328 aaPredicted RBP17.88■□□□□ 0.45
HDAC4-201ENST00000345617 FAM227AF5H4B4 570 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 NKX2-1P43699 371 aaPredicted RBP17.88■□□□□ 0.45
HDAC4-201ENST00000345617 OR2B8PP59922 312 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 C6orf132Q5T0Z8 1188 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 OR2G6Q5TZ20 316 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 ZNF778Q96MU6 729 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 NUDT22Q9BRQ3 303 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 NKX2-4Q9H2Z4 354 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 RPH3ALQ9UNE2 315 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 ZNF727A8MUV8 499 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 RPL7L1Q6DKI1 246 aaKnown RBP17.88■□□□□ 0.45
HDAC4-201ENST00000345617 SLC35A4Q96G79 324 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 C20orf24Q9BUV8 137 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 A6NIN4 97 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 FUCA1P04066 466 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 HTR5AP47898 357 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 ADOQ96SZ5 270 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 SRRQ9GZT4 340 aa17.88■□□□□ 0.45
HDAC4-201ENST00000345617 CICQ96RK0 1608 aaPredicted RBP17.87■□□□□ 0.45
HDAC4-201ENST00000345617 ZFAND5O76080 213 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 NTSR1P30989 418 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 NPY4RP50391 375 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 GJC3Q8NFK1 279 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 SMIM7Q9BQ49 75 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 ZDHHC11Q9H8X9 412 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 DUSP22Q9NRW4 184 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 CLCF1Q9UBD9 225 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 VDAC3Q9Y277 283 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 OR10A3P58181 314 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 SMN1Q16637 294 aaKnown RBP17.87■□□□□ 0.45
HDAC4-201ENST00000345617 CDONQ4KMG0 1287 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 TMEM184AQ6ZMB5 413 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 CMTM3Q96MX0 182 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 GABARAPL3Q9BY60 117 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 SMG9Q9H0W8 520 aaKnown RBP17.87■□□□□ 0.45
HDAC4-201ENST00000345617 CLDND1Q9NY35 253 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 ARFGEF1Q9Y6D6 1849 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 NCBP2LA6PVI3 153 aaKnown RBP17.87■□□□□ 0.45
HDAC4-201ENST00000345617 PRAMEF26H0Y7S4 382 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 SELEP16581 610 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 OR8G2PQ6IF36 304 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 OR51S1Q8NGJ8 323 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 MUCL1Q96DR8 90 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 SEC22AQ96IW7 307 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 KCMF1Q9P0J7 381 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 NOTCH3Q9UM47 2321 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms