RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 TMEM65Q6PI78 240 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 UEVLDQ8IX04 471 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 DNAJA3Q96EY1 480 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 SLC6A18Q96N87 628 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 OR10A2Q9H208 303 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 PPP1R3EQ9H7J1 279 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 MOB1AQ9H8S9 216 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 RHOFQ9HBH0 211 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 A0A087WZY1 265 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 SERINC4A6NH21 518 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 HIDE1A8MVS5 230 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 DUS4LO95620 317 aaKnown RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 IGHA1P01876 353 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 WNT1P04628 370 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 SFTA3P0C7M3 94 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 P2RY2P41231 377 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 RAB4BP61018 213 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 MALLQ13021 153 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 RUNX3Q13761 415 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 INSL4Q14641 139 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 FAM74A1Q5RGS3 127 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ESPNLQ6ZVH7 1005 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 TMPRSS9Q7Z410 1059 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 WDR34Q96EX3 536 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 LINC00052Q96N35 136 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 HDAC8Q9BY41 377 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 FKRPQ9H9S5 495 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ENY2Q9NPA8 101 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 DKKL1Q9UK85 242 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 A0A1W2PR48 441 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 UMAD1C9J7I0 102 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 HLA-HP01893 362 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 CD80P33681 288 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 DCAF7P61962 342 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 DLX2Q07687 328 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 TMPRSS11FQ6ZWK6 438 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 DPPA2Q7Z7J5 298 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 WFDC5Q8TCV5 224 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 KCNJ15Q99712 375 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 RNF150Q9ULK6 438 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 FBXO7Q9Y3I1 522 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 E5RGE8 158 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF587BE7ETH6 402 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 SLC35E2P0CK97 266 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 TMEM225BP0DP42 221 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 YBX1P67809 324 aaKnown RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 RPP30P78346 268 aaKnown RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 H3F3AP84243 136 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 EIF4EBP2Q13542 120 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 LYPD8Q6UX82 237 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 TRILQ7L0X0 811 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 NAXEQ8NCW5 288 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 OR14A16Q8NHC5 309 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 HHIPL1Q96JK4 782 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 MS4A4AQ96JQ5 239 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 CXorf58Q96LI9 332 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 NMNAT2Q9BZQ4 307 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 OR52A1Q9UKL2 312 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 NSG2Q9Y328 171 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 PRAMEF27A3QJZ7 478 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 M0QYG6 137 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 CD22P20273 847 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ZFP36L2P47974 494 aaKnown RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 EFNA3P52797 238 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 VWA2Q5GFL6 755 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 PRAMEF9Q5VWM5 478 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 MED25Q71SY5 747 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 OVCH2Q7RTZ1 564 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 WDR5BQ86VZ2 330 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 MCATQ8IVS2 390 aaKnown RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ZDHHC22Q8N966 263 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 OR5M9Q8NGP3 310 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 OR1S1Q8NH92 325 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 HGDQ93099 445 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF251Q9BRH9 671 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 NCDNQ9UBB6 729 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 BRCA1P38398 1863 aaKnown RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 SBF1O95248 1867 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 A8MXE2 369 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 MSTNO14793 375 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 CCNOP22674 350 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ARRB1P49407 418 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 UBE2MP61081 183 aaKnown RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 IL10RAQ13651 578 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 OR7A5Q15622 319 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 TANGO2Q6ICL3 276 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 PLXDC1Q8IUK5 500 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 CCDC71Q8IV32 467 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 OR14L1PQ8NHC6 308 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ST7LQ8TDW4 575 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 RSPRY1Q96DX4 576 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 SAT2Q96F10 170 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 PELI1Q96FA3 418 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 SLC46A2Q9BY10 475 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 SMIM3Q9BZL3 60 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 A0A1W2PQU0 124 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 PPP5D1E7EU14 171 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 CCSO14618 274 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF749O43361 778 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms