RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 A0A087WUJ7 227 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 TMEM235A6NFC5 223 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 TRIM64A6NGJ6 449 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 ZNF780AO75290 641 aaPredicted RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 AKR7A3O95154 331 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 DPP4P27487 766 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 P2RX1P51575 399 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 AFF3P51826 1226 aaKnown RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 CLDN17P56750 224 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 DCDP81605 110 aaKnown RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 FAM109BQ6ICB4 259 aaPredicted RBP6.56□□□□□ -1.36
VCAN-202ENST00000342785 AGBL5Q8NDL9 886 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 OR10K1Q8NGX5 313 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 C3orf49Q96BT1 292 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 GPA33Q99795 319 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 B3GALT1Q9Y5Z6 326 aa6.56□□□□□ -1.36
VCAN-202ENST00000342785 OTOL1A6NHN0 477 aaPredicted RBP6.55□□□□□ -1.36
VCAN-202ENST00000342785 ICMTO60725 284 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 BLVRBP30043 206 aaPredicted RBP6.55□□□□□ -1.36
VCAN-202ENST00000342785 LAIR1Q6GTX8 287 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 ANGPTL5Q86XS5 388 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 LAT2Q9GZY6 243 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 NSG1A0A0A6YYJ2 146 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 A6NLC8 198 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 PMS2P2O95744 297 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 GABRG2P18507 467 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 CD79BP40259 229 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 AKR1C2P52895 323 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 UBE2MP61081 183 aaKnown RBP6.55□□□□□ -1.36
VCAN-202ENST00000342785 EMC4Q5J8M3 183 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 LRRC69Q6ZNQ3 347 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 ZSCAN1Q8NBB4 408 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 SNIP1Q8TAD8 396 aaKnown RBP6.55□□□□□ -1.36
VCAN-202ENST00000342785 GLS2Q9UI32 602 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 TRAV1-2A0A0B4J238 106 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 KRBOX1C9JBD0 128 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 SIGLEC6O43699 453 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 ALOX12BO75342 701 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 ZFPL1O95159 310 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 FOLR3P41439 243 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 RAD52P43351 418 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 RGS19P49795 217 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 SEC61A1P61619 476 aaKnown RBP6.55□□□□□ -1.36
VCAN-202ENST00000342785 IL10RAQ13651 578 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 TMPPEQ6ZT21 453 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 RHOUQ7L0Q8 258 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 NKAIN3Q8N8D7 197 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 OR6C1Q96RD1 312 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 PLA2G2FQ9BZM2 168 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 SAV1Q9H4B6 383 aaPredicted RBP6.55□□□□□ -1.36
VCAN-202ENST00000342785 FAM86C1Q9NVL1 165 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 KCNG2Q9UJ96 466 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 RAB22AQ9UL26 194 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 TRPM6Q9BX84 2022 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 A0A1W2PPV9 198 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 H0YIG0 161 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 PLPP2O43688 288 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 PRICKLE3O43900 615 aaPredicted RBP6.55□□□□□ -1.36
VCAN-202ENST00000342785 ICOSLGO75144 302 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 GIPP09681 153 aaPredicted RBP6.55□□□□□ -1.36
VCAN-202ENST00000342785 ACHEP22303 614 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 GABREP78334 506 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 NINJ1Q92982 152 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 SMIM3Q9BZL3 60 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 MED29Q9NX70 200 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 SLC22A23A1A5C7 686 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 FADS1O60427 444 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 FBXO24O75426 580 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 STK17BO94768 372 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 IFNA5P01569 189 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 CHRM2P08172 466 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 DBHP09172 617 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 POU3F3P20264 500 aaPredicted RBP6.55□□□□□ -1.36
VCAN-202ENST00000342785 ZNF628Q5EBL2 1059 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 TCTE3Q8IZS6 198 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 PAQR8Q8TEZ7 354 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 MVB12AQ96EY5 273 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 ATG2BQ96BY7 2078 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 FOCADQ5VW36 1801 aa6.55□□□□□ -1.36
VCAN-202ENST00000342785 H3BUI4 141 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 GPR171O14626 319 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 OR7C1O76099 320 aaPredicted RBP6.54□□□□□ -1.36
VCAN-202ENST00000342785 PTHLHP12272 177 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 MTCP1P56278 107 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 DBPQ10586 325 aaPredicted RBP6.54□□□□□ -1.36
VCAN-202ENST00000342785 PMPCAQ10713 525 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 CORO6Q6QEF8 472 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 GLIPR1L1Q6UWM5 242 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 MEX3BQ6ZN04 569 aaKnown RBP6.54□□□□□ -1.36
VCAN-202ENST00000342785 Q6ZS52 159 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 STK35Q8TDR2 534 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 MIB2Q96AX9 1013 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 RRNAD1Q96FB5 475 aaKnown RBP6.54□□□□□ -1.36
VCAN-202ENST00000342785 BARHL1Q9BZE3 327 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 TAS2R4Q9NYW5 299 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 SIPA1L1O43166 1804 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 CD3DP04234 171 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 GALP22466 123 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 MAP2K6P52564 334 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 FIP1L1Q6UN15 594 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms