RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 C9JQL5 133 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 STMND1H3BQB6 276 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 NDUFS4O43181 175 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 FUT1P19526 365 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 VAMP1P23763 118 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 OR1G1P47890 313 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 ACY1Q03154 408 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 HNF4GQ14541 408 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 BEND2Q8NDZ0 799 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 OR5AK2Q8NH90 309 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 SECTM1Q8WVN6 248 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 UNKLQ9H9P5 680 aaKnown RBP16.82■□□□□ 0.28
SMPD1-201ENST00000342245 C20orf141Q9NUB4 165 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 DNAJB11Q9UBS4 358 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 MEIS3P1A6NDR6 274 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 C5orf51A6NDU8 294 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 DUS4LO95620 317 aaKnown RBP16.82■□□□□ 0.28
SMPD1-201ENST00000342245 NAA10P41227 235 aaPredicted RBP16.82■□□□□ 0.28
SMPD1-201ENST00000342245 NDUFA6P56556 154 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 CXCL17Q6UXB2 119 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 FAM220AQ7Z4H9 259 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 ARL14Q8N4G2 192 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 LILRA3Q8N6C8 439 aaPredicted RBP16.82■□□□□ 0.28
SMPD1-201ENST00000342245 FRMD1Q8N878 549 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 CCDC54Q8NEL0 328 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 SEH1LQ96EE3 360 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 IP6K3Q96PC2 410 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 KLF16Q9BXK1 252 aaPredicted RBP16.82■□□□□ 0.28
SMPD1-201ENST00000342245 LHX9Q9NQ69 397 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 WASF3Q9UPY6 502 aa16.82■□□□□ 0.28
SMPD1-201ENST00000342245 LOC100289279A0A1B0GTE1 492 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 EEF1E1-BLOC1S5C9J1V9 151 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 THBS1P07996 1170 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 ZNF136P52737 540 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 PPP1R1AQ13522 171 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 PRSS54Q6PEW0 395 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 OR13C8Q8NGS7 320 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 CDCA3Q99618 268 aaPredicted RBP16.81■□□□□ 0.28
SMPD1-201ENST00000342245 RNF126Q9BV68 326 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 EPHX3Q9H6B9 360 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 CUTCQ9NTM9 273 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 DOK5Q9P104 306 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 PADI3Q9ULW8 664 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 STARD10Q9Y365 291 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.81■□□□□ 0.28
SMPD1-201ENST00000342245 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.81■□□□□ 0.28
SMPD1-201ENST00000342245 GNRH1P01148 92 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 CRABP1P29762 137 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 SLC7A9P82251 487 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 UNQ6494/PRO21346Q6UXR6 183 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 NPSR1Q6W5P4 371 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 ZNF574Q6ZN55 896 aaPredicted RBP16.81■□□□□ 0.28
SMPD1-201ENST00000342245 C17orf64Q86WR6 236 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 ZSCAN4Q8NAM6 433 aaPredicted RBP16.81■□□□□ 0.28
SMPD1-201ENST00000342245 NUP43Q8NFH3 380 aa16.81■□□□□ 0.28
SMPD1-201ENST00000342245 TRBV5-7A0A0A0MS05 114 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 A0A0A6YYD5 115 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 A0A0A6YYH2 397 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 A6NJ64 397 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 MARCH11A6NNE9 402 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 MBP02144 154 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 CRYABP02511 175 aaKnown RBP16.8■□□□□ 0.28
SMPD1-201ENST00000342245 ADRB3P13945 408 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 NANOS3P60323 173 aaKnown RBP16.8■□□□□ 0.28
SMPD1-201ENST00000342245 ACTBL2Q562R1 376 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 PRRT3Q5FWE3 981 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 C9orf64Q5T6V5 341 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 OR4C11Q6IEV9 310 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 ZNF836Q6ZNA1 936 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 OR52E2Q8NGJ4 325 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 CCDC74AQ96AQ1 378 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 RSPRY1Q96DX4 576 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 GALNT14Q96FL9 552 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 YPEL4Q96NS1 127 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 C19orf12Q9NSK7 152 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 MARCH5Q9NX47 278 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 VSIG4Q9Y279 399 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 MRPS33Q9Y291 106 aaKnown RBP16.8■□□□□ 0.28
SMPD1-201ENST00000342245 ZNF587BE7ETH6 402 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 M0QYG6 137 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 PPP1R2P9O14990 202 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 PET100P0DJ07 73 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 S1PR1P21453 382 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 CD52P31358 61 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 ARRB1P49407 418 aaPredicted RBP16.8■□□□□ 0.28
SMPD1-201ENST00000342245 ADPRHP54922 357 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 RAP1AP62834 184 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 ADAM8P78325 824 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 PLA2G7Q13093 441 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 PPA1Q15181 289 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 SCGB2B2Q4G0G5 96 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 RNASE10Q5GAN6 216 aaKnown RBP16.8■□□□□ 0.28
SMPD1-201ENST00000342245 ZNF610Q8N9Z0 462 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 OR7G2Q8NG99 324 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 OR51D1Q8NGF3 324 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 SNIP1Q8TAD8 396 aaKnown RBP16.8■□□□□ 0.28
SMPD1-201ENST00000342245 SCAMP4Q969E2 229 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 TAF9BQ9HBM6 251 aa16.8■□□□□ 0.28
SMPD1-201ENST00000342245 H7C1Q1 480 aa16.79■□□□□ 0.28
SMPD1-201ENST00000342245 SMAD9O15198 467 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms