RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 SLC26A10Q8NG04 563 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 MRPL48Q96GC5 212 aaKnown RBP13.04□□□□□ -0.32
CBX3-201ENST00000337620 OR51E2Q9H255 320 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 KCNG2Q9UJ96 466 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 GNG8Q9UK08 70 aa13.04□□□□□ -0.32
CBX3-201ENST00000337620 LOC100506127A0A0U1RQW1 187 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 AQP8O94778 261 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 ZNF432O94892 652 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 PSKH1P11801 424 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 NR2C1P13056 603 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 CELP19835 753 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 NTF4P34130 210 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 ENTPD1P49961 510 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 VBP1P61758 197 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 CDONQ4KMG0 1287 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 SLC25A47Q6Q0C1 308 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 VASH1Q7L8A9 365 aaPredicted RBP13.03□□□□□ -0.32
CBX3-201ENST00000337620 ATCAYQ86WG3 371 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 TMEM123Q8N131 208 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 OTOSQ8NHW6 89 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 RNF128Q8TEB7 428 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 TMEM54Q969K7 222 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 PNPLA2Q96AD5 504 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 TRIM36Q9NQ86 728 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 KLHL9Q9P2J3 617 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 ZMIZ1Q9ULJ6 1067 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 LHX6Q9UPM6 363 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 TMEM14AQ9Y6G1 99 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 LRRTM2O43300 516 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 ALOX5APP20292 161 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 LAP3P28838 519 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 CDAP32320 146 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 PLA2G5P39877 138 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 ACSM1Q08AH1 577 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 TPBGQ13641 420 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 PHYHD1Q5SRE7 291 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 SIAH3Q8IW03 269 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 TMEM203Q969S6 136 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 MNTQ99583 582 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 CHCHD6Q9BRQ6 235 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 DCUN1D5Q9BTE7 237 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 ZNF71Q9NQZ8 489 aaPredicted RBP13.03□□□□□ -0.32
CBX3-201ENST00000337620 NDUFB11Q9NX14 153 aa13.03□□□□□ -0.32
CBX3-201ENST00000337620 NCOR2Q9Y618 2525 aa13.02□□□□□ -0.32
CBX3-201ENST00000337620 PRR32B1ATL7 298 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 E9PI62 339 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 TAF4O00268 1085 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 SLC43A1O75387 559 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 GAAP10253 952 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 PSMA1P25786 263 aaKnown RBP13.02□□□□□ -0.33
CBX3-201ENST00000337620 PCSK6P29122 969 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 AQP6Q13520 282 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 RPTNQ6XPR3 784 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 SYS1Q8N2H4 156 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 OR10H5Q8NGA6 315 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 C11orf40Q8WZ69 217 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 MYCBPQ99417 103 aaPredicted RBP13.02□□□□□ -0.33
CBX3-201ENST00000337620 CDADC1Q9BWV3 514 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 IKZF2Q9UKS7 526 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 CLEC4AQ9UMR7 237 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 RCE1Q9Y256 329 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 NOSIPQ9Y314 301 aaKnown RBP13.02□□□□□ -0.33
CBX3-201ENST00000337620 PTPRQQ9UMZ3 2332 aa13.02□□□□□ -0.33
CBX3-201ENST00000337620 A0A1B0GVC2 190 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 AQP7O14520 342 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 GPR171O14626 319 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 TGFBR1P36897 503 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 GBX2P52951 348 aaPredicted RBP13.01□□□□□ -0.33
CBX3-201ENST00000337620 NCS1P62166 190 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 EIF2B1Q14232 305 aaKnown RBP13.01□□□□□ -0.33
CBX3-201ENST00000337620 SOWAHCQ53LP3 525 aaPredicted RBP13.01□□□□□ -0.33
CBX3-201ENST00000337620 SLC18B1Q6NT16 456 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 C19orf48Q6RUI8 117 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 PLEKHG7Q6ZR37 379 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.01□□□□□ -0.33
CBX3-201ENST00000337620 MCEMP1Q8IX19 187 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 TUSC5Q8IXB3 177 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 C20orf196Q8IYI0 205 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 HTRA1Q92743 480 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 INTS12Q96CB8 462 aaKnown RBP13.01□□□□□ -0.33
CBX3-201ENST00000337620 PELI1Q96FA3 418 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 RBM24Q9BX46 236 aaKnown RBP13.01□□□□□ -0.33
CBX3-201ENST00000337620 ULBP2Q9BZM5 246 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 CALHM2Q9HA72 323 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 EXOSC4Q9NPD3 245 aaKnown RBP13.01□□□□□ -0.33
CBX3-201ENST00000337620 ACOXLQ9NUZ1 547 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 FOXD3Q9UJU5 478 aaPredicted RBP13.01□□□□□ -0.33
CBX3-201ENST00000337620 GRIP1Q9Y3R0 1128 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 SIRT4Q9Y6E7 314 aaPredicted RBP13.01□□□□□ -0.33
CBX3-201ENST00000337620 IGKV3D-15A0A087WSY6 115 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 A0A1B0GTH9 108 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 A0A1W2PPW3 197 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 PHYHO14832 338 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 HRGP04196 525 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 OR8G3PP0DMU2 310 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 GUCA1AP43080 201 aaPredicted RBP13.01□□□□□ -0.33
CBX3-201ENST00000337620 BDH1Q02338 343 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 SPCS2Q15005 226 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 TIMM50Q3ZCQ8 353 aa13.01□□□□□ -0.33
CBX3-201ENST00000337620 RPUSD3Q6P087 351 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms