RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 RBMXL1Q96E39 390 aaKnown RBP12.59□□□□□ -0.39
RTN4-202ENST00000337526 TSSK2Q96PF2 358 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 ZNF416Q9BWM5 594 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 A0A0A6YYJ9 748 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 OTOL1A6NHN0 477 aaPredicted RBP12.59□□□□□ -0.39
RTN4-202ENST00000337526 IFITM5A6NNB3 132 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 CD63P08962 238 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 RPS27P42677 84 aaKnown RBP12.59□□□□□ -0.39
RTN4-202ENST00000337526 CDK5R1Q15078 307 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 SOHLH1Q5JUK2 328 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 TIGD3Q6B0B8 471 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 LPCAT3Q6P1A2 487 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 FAM122BQ7Z309 247 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 HSD17B11Q8NBQ5 300 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 HMGCLL1Q8TB92 370 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 MARC2Q969Z3 335 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 OR6C1Q96RD1 312 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 CCNL2Q96S94 520 aaPredicted RBP12.59□□□□□ -0.39
RTN4-202ENST00000337526 EMC6Q9BV81 110 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 SLAMF7Q9NQ25 335 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 NRAPQ86VF7 1730 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 CCSO14618 274 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 ZNF728P0DKX0 622 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 SDHAP31040 664 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 EPHA4P54764 986 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 UBE2KP61086 200 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 GPATCH2Q9NW75 528 aa12.59□□□□□ -0.39
RTN4-202ENST00000337526 TMEM184BQ9Y519 407 aaPredicted RBP12.59□□□□□ -0.39
RTN4-202ENST00000337526 CBX7O95931 251 aa12.58□□□□□ -0.39
RTN4-202ENST00000337526 EIF1P41567 113 aaKnown RBP12.58□□□□□ -0.39
RTN4-202ENST00000337526 MSMO1Q15800 293 aa12.58□□□□□ -0.39
RTN4-202ENST00000337526 FAM27D1Q5T7N8 215 aa12.58□□□□□ -0.39
RTN4-202ENST00000337526 PARM1Q6UWI2 310 aa12.58□□□□□ -0.39
RTN4-202ENST00000337526 LIMS2Q7Z4I7 341 aa12.58□□□□□ -0.39
RTN4-202ENST00000337526 CCDC190Q86UF4 302 aa12.58□□□□□ -0.39
RTN4-202ENST00000337526 WDR5BQ86VZ2 330 aa12.58□□□□□ -0.39
RTN4-202ENST00000337526 CMTM4Q8IZR5 234 aa12.58□□□□□ -0.39
RTN4-202ENST00000337526 WDSUB1Q8N9V3 476 aa12.58□□□□□ -0.39
RTN4-202ENST00000337526 POFUT1Q9H488 388 aa12.58□□□□□ -0.39
RTN4-202ENST00000337526 PRMT8Q9NR22 394 aaPredicted RBP12.58□□□□□ -0.39
RTN4-202ENST00000337526 ZNF223Q9UK11 482 aaPredicted RBP12.58□□□□□ -0.39
RTN4-202ENST00000337526 A0A0B4J203 849 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 CEBPZOSA8MTT3 80 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 EIF4EP06730 217 aaKnown RBP12.58□□□□□ -0.4
RTN4-202ENST00000337526 CLDN20P56880 219 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 FBXL6Q8N531 539 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 PLPP5Q8NEB5 264 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 PIGTQ969N2 578 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 LINC00615Q96LM1 132 aaPredicted RBP12.58□□□□□ -0.4
RTN4-202ENST00000337526 LRFN5Q96NI6 719 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 MED18Q9BUE0 208 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 ISG20L2Q9H9L3 353 aaKnown RBP12.58□□□□□ -0.4
RTN4-202ENST00000337526 BOKQ9UMX3 212 aaPredicted RBP12.58□□□□□ -0.4
RTN4-202ENST00000337526 AGAP14A8MT82 685 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 ZNF705FA8MVS1 300 aaPredicted RBP12.58□□□□□ -0.4
RTN4-202ENST00000337526 EIF1BO60739 113 aaKnown RBP12.58□□□□□ -0.4
RTN4-202ENST00000337526 CTSLP07711 333 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 ZNF705DP0CH99 300 aaPredicted RBP12.58□□□□□ -0.4
RTN4-202ENST00000337526 ZNF705BP0CI00 300 aaPredicted RBP12.58□□□□□ -0.4
RTN4-202ENST00000337526 IKZF1Q13422 519 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 ACKR1Q16570 336 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 ANKRD33Q7Z3H0 272 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 ARIH2OSQ8N7S6 290 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 CLEC1AQ8NC01 280 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 FAM71CQ8NEG0 241 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 TMEM221A6NGB7 291 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 ST6GAL1P15907 406 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 GJC3Q8NFK1 279 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 CCL4L1Q8NHW4 92 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 SCPEP1Q9HB40 452 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 SDHAF2Q9NX18 166 aa12.58□□□□□ -0.4
RTN4-202ENST00000337526 LOC107986453A0A1B0GWG9 222 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 AKR7A2O43488 359 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 GMDSO60547 372 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 ZNF780AO75290 641 aaPredicted RBP12.57□□□□□ -0.4
RTN4-202ENST00000337526 AKR7A3O95154 331 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 ICAM2P13598 275 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 MYOGP15173 224 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 ACHEP22303 614 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 KIR2DL3P43628 341 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 TAS2R30P59541 319 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 ARG2P78540 354 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 OGFOD3Q6PK18 319 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 CD300LGQ6UXG3 332 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 TMEM200AQ86VY9 491 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 PRSS35Q8N3Z0 413 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 BANF2Q9H503 90 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 OR14J1Q9UGF5 321 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 TMEM235A6NFC5 223 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 A8MXE2 369 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 HSPB6O14558 160 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 PRAMEF4O60810 478 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 MRPS34P82930 218 aaKnown RBP12.57□□□□□ -0.4
RTN4-202ENST00000337526 DBPQ10586 325 aaPredicted RBP12.57□□□□□ -0.4
RTN4-202ENST00000337526 CLINT1Q14677 625 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 AADACL3Q5VUY0 350 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 ANKRD53Q8N9V6 530 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 ZNF680Q8NEM1 530 aa12.57□□□□□ -0.4
RTN4-202ENST00000337526 BAHD1Q8TBE0 780 aaPredicted RBP12.57□□□□□ -0.4
RTN4-202ENST00000337526 RNF170Q96K19 258 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms