RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 NT5DC2Q9H857 520 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 HPF1Q9NWY4 346 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 SF3B6Q9Y3B4 125 aaKnown RBP7.48□□□□□ -1.21
HPS4-201ENST00000336873 RHBDD3Q9Y3P4 386 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 NUBP2Q9Y5Y2 271 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 ZNF407Q9C0G0 2248 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 PLXNA3P51805 1871 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 KIAA2026Q5HYC2 2103 aa7.48□□□□□ -1.21
HPS4-201ENST00000336873 CADP27708 2225 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 TRAV8-7A0A075B6U6 113 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 ARRDC5A6NEK1 342 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 E9PQ18 207 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 PYCARD-AS1I3L0S3 204 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 SYT7O43581 403 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 EFEMP2O95967 443 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 AK1P00568 194 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 CFL1P23528 166 aaKnown RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 FGF9P31371 208 aaPredicted RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 CLDN20P56880 219 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 EXOSC2Q13868 293 aaKnown RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 GLT8D1Q68CQ7 371 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 SLC18B1Q6NT16 456 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 ARSKQ6UWY0 536 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 APOBEC4Q8WW27 367 aaKnown RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 NR4A3Q92570 626 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 TAAR8Q969N4 342 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 WDR89Q96FK6 387 aaPredicted RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 C19orf43Q9BQ61 176 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 SMIM3Q9BZL3 60 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 SEMA6CQ9H3T2 930 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 HRASLSQ9HDD0 168 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 MED17Q9NVC6 651 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 TAS2R4Q9NYW5 299 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 NPAP1Q9NZP6 1156 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 PPP4R1LQ9P1A2 415 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 PLXNB3Q9ULL4 1909 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 MTCL1Q9Y4B5 1905 aaKnown RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 A0A1B0GW55 424 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 ZNF705EA8MWA4 302 aaPredicted RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 ERVH48-1M5A8F1 160 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 GPR171O14626 319 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 DPM1O60762 260 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 HLA-AP01891 365 aaKnown RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 C1QBP02746 253 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 DUX4L2P0CJ85 424 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 DUX4L3P0CJ86 424 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 DUX4L4P0CJ87 422 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 DUX4L5P0CJ88 424 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 DUX4L6P0CJ89 424 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 DUX4L7P0CJ90 424 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 IL9P15248 144 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 M6PRP20645 277 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 CLRN1P58418 232 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 GPR85P60893 370 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 HNRNPKP61978 463 aaKnown RBP eCLIP7.47□□□□□ -1.21
HPS4-201ENST00000336873 POU4F2Q12837 409 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 PLA2G7Q13093 441 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 OPCMLQ14982 345 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 PDCD1Q15116 288 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 TMEM176BQ3YBM2 270 aaPredicted RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 RNASE10Q5GAN6 216 aaKnown RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 RAB12Q6IQ22 244 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 OR4D10Q8NGI6 311 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 SLC2A12Q8TD20 617 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 TOMM40LQ969M1 308 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 ANKRD9Q96BM1 317 aaPredicted RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 AMELYQ99218 206 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 DEFB126Q9BYW3 111 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 DUX4Q9UBX2 424 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 ACAD8Q9UKU7 415 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 TMEM184BQ9Y519 407 aaPredicted RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 PIEZO2Q9H5I5 2752 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 SDCBPO00560 298 aaPredicted RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 CYR61O00622 381 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 SSX5O60225 188 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 HLA-DOBP13765 273 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 FCARP24071 287 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 MAPK3P27361 379 aaPredicted RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 NUP62P37198 522 aaPredicted RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 DIO1P49895 249 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 BIDP55957 195 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 RPS15P62841 145 aaKnown RBP7.47□□□□□ -1.21
HPS4-201ENST00000336873 GLO1Q04760 184 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 FAM198BQ6UWH4 519 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 NPSR1Q6W5P4 371 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 KCTD20Q7Z5Y7 419 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 SLC35F3Q8IY50 421 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 BPIFB2Q8N4F0 458 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 OR11H4Q8NGC9 324 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 OR51A2Q8NGJ7 313 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 ZFAND1Q8TCF1 268 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 MR1Q95460 341 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 ARL5BQ96KC2 179 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 OR6C1Q96RD1 312 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 CRB3Q9BUF7 120 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 GON7Q9BXV9 100 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 KLHDC2Q9Y2U9 406 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 RALGAPA1Q6GYQ0 2036 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 CACNA1BQ00975 2339 aa7.47□□□□□ -1.21
HPS4-201ENST00000336873 SPTY2D1-AS1A0A0U1RR47 76 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms