RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ZNF321PQ8N8H1 164 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 CPEB3Q8NE35 698 aaKnown RBP12.06□□□□□ -0.48
HLCS-201ENST00000336648 OR52I1Q8NGK6 324 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 MACROD1Q9BQ69 325 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 IFT22Q9H7X7 185 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 PISDQ9UG56 409 aa12.06□□□□□ -0.48
HLCS-201ENST00000336648 HEMK1Q9Y5R4 338 aaPredicted RBP12.06□□□□□ -0.48
HLCS-201ENST00000336648 TERTO14746 1132 aaKnown RBP12.05□□□□□ -0.48
HLCS-201ENST00000336648 AP1G1O43747 822 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 TUSC2O75896 110 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 VAMP5O95183 116 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 HLA-FP30511 346 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 GJA4P35212 333 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 DDOSTP39656 456 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 CEBPEQ15744 281 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 HYAL4Q2M3T9 481 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 SIAH3Q8IW03 269 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 PLPP6Q8IY26 295 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 ANKRD53Q8N9V6 530 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 TM4SF18Q96CE8 201 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 SEH1LQ96EE3 360 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 JAM3Q9BX67 310 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 C20orf85Q9H1P6 137 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 PPP6CO00743 305 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 PHF1O43189 567 aaPredicted RBP12.05□□□□□ -0.48
HLCS-201ENST00000336648 NCR1O76036 304 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 HPNP05981 417 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 SHC1P29353 583 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 CLINT1Q14677 625 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 SMN1Q16637 294 aaKnown RBP12.05□□□□□ -0.48
HLCS-201ENST00000336648 SHISA6Q6ZSJ9 500 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 XRN1Q8IZH2 1706 aaKnown RBP12.05□□□□□ -0.48
HLCS-201ENST00000336648 ADIPOR1Q96A54 375 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 SLC35A4Q96G79 324 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 NUDT22Q9BRQ3 303 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 HCFC1R1Q9NWW0 138 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 TFAP2AP05549 437 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 ZNF90Q03938 601 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 LEXMQ3ZCV2 418 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 EMC4Q5J8M3 183 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 PXDC1Q5TGL8 231 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 GRINAQ7Z429 371 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 CISD2Q8N5K1 135 aaKnown RBP12.05□□□□□ -0.48
HLCS-201ENST00000336648 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.05□□□□□ -0.48
HLCS-201ENST00000336648 A6NIN4 97 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 SLCO2B1O94956 709 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 EMP3P54852 163 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 MFSD12Q6NUT3 480 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 RNF150Q9ULK6 438 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 H7BYZ3 331 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 APOBEC1P41238 236 aaKnown RBP12.05□□□□□ -0.48
HLCS-201ENST00000336648 CRMP1Q14194 572 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 PET117Q6UWS5 81 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 ZNF813Q6ZN06 617 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 MED25Q71SY5 747 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 TMEM130Q8N3G9 435 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 ASB13Q8WXK3 278 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 TAF9BQ9HBM6 251 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 HEYLQ9NQ87 328 aaPredicted RBP12.05□□□□□ -0.48
HLCS-201ENST00000336648 DECR2Q9NUI1 292 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 MED9Q9NWA0 146 aa12.05□□□□□ -0.48
HLCS-201ENST00000336648 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
HLCS-201ENST00000336648 C7orf72A4D263 438 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 TRABD2BA6NFA1 517 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 SIX6O95475 246 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 GLAP06280 429 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 H1FNTQ75WM6 255 aaPredicted RBP12.04□□□□□ -0.48
HLCS-201ENST00000336648 PRICKLE2Q7Z3G6 844 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 ST8SIA4Q92187 359 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 SEC22AQ96IW7 307 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 NMNAT3Q96T66 252 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 KIR3DX1Q9H7L2 352 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 PDGFBP01127 241 aaPredicted RBP12.04□□□□□ -0.48
HLCS-201ENST00000336648 GIPP09681 153 aaPredicted RBP12.04□□□□□ -0.48
HLCS-201ENST00000336648 ADRA2CP18825 462 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 SRMP19623 302 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 RGRP47804 291 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 LGALS4P56470 323 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 ZNF718Q3SXZ3 478 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 FCRL6Q6DN72 434 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 DHRS4L2Q6PKH6 230 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 APH1AQ96BI3 265 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 EGLN1Q9GZT9 426 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 PLK3Q9H4B4 646 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 TNFRSF10CO14798 259 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 ENSAO43768 121 aaKnown RBP12.04□□□□□ -0.48
HLCS-201ENST00000336648 KIAA1024LP59773 190 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 CDKN3Q16667 212 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.04□□□□□ -0.48
HLCS-201ENST00000336648 FAM71E1Q6IPT2 247 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 CXorf36Q9H7Y0 433 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 SPP1P10451 314 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 IL10RAQ13651 578 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 VN1R2Q8NFZ6 395 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 OR51A4Q8NGJ6 313 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 SHARPINQ9H0F6 387 aa12.04□□□□□ -0.48
HLCS-201ENST00000336648 PRAMEF25A6NGN4 478 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 P2RY10O00398 339 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 DMWDQ09019 674 aa12.03□□□□□ -0.48
HLCS-201ENST00000336648 LYRM7Q5U5X0 104 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms