RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 SLC17A1Q14916 467 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 COL13A1Q5TAT6 717 aaPredicted RBP13.36□□□□□ -0.27
UBA1-201ENST00000335972 B3GNTL1Q67FW5 361 aaPredicted RBP13.36□□□□□ -0.27
UBA1-201ENST00000335972 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.36□□□□□ -0.27
UBA1-201ENST00000335972 DCBLD2Q96PD2 775 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 EXOSC3Q9NQT5 275 aaKnown RBP13.36□□□□□ -0.27
UBA1-201ENST00000335972 SLC22A11Q9NSA0 550 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 MMACHCQ9Y4U1 282 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 PHF3Q92576 2039 aaKnown RBP13.36□□□□□ -0.27
UBA1-201ENST00000335972 BLACEA4D250 179 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 TXNDC12O95881 172 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 C2orf76Q3KRA6 126 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 FAM198BQ6UWH4 519 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 TEX261Q6UWH6 196 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 ZNF227Q86WZ6 799 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 SDR16C5Q8N3Y7 309 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 MEIOBQ8N635 442 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 OR1N1Q8NGS0 311 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 RPS4Y2Q8TD47 263 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 ABHD6Q9BV23 337 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 ATG5Q9H1Y0 275 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 RANBP3Q9H6Z4 567 aaPredicted RBP13.36□□□□□ -0.27
UBA1-201ENST00000335972 U3KQ87 197 aa13.36□□□□□ -0.27
UBA1-201ENST00000335972 ALG1L2C9J202 215 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 G3V3Q6 166 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 ZBTB37Q5TC79 503 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 TSSK4Q6SA08 328 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 ZNF627Q7L945 461 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 TTYH1Q9H313 450 aaPredicted RBP13.35□□□□□ -0.27
UBA1-201ENST00000335972 COPZ2Q9P299 210 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 LIPCP11150 499 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 APEHP13798 732 aaKnown RBP13.35□□□□□ -0.27
UBA1-201ENST00000335972 IFNGR1P15260 489 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 HACD4Q5VWC8 232 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 ZNF782Q6ZMW2 699 aaPredicted RBP13.35□□□□□ -0.27
UBA1-201ENST00000335972 OR4C16Q8NGL9 310 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 LIPHQ8WWY8 451 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 OR8B4Q96RC9 309 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 GINS4Q9BRT9 223 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 C1QTNF6Q9BXI9 259 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 CHST6Q9GZX3 395 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 HEXA-AS1Q9H8Q6 139 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 SUSD2Q9UGT4 822 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 ARID1AO14497 2285 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 LOC100509620A0A075B734 347 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 ANKRD20A5PA0PJZ0 165 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 ZNF254O75437 659 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 GLSO94925 669 aaPredicted RBP13.35□□□□□ -0.27
UBA1-201ENST00000335972 RAF1P04049 648 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 VSIG10L2P0DP72 767 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 MAPK3P27361 379 aaPredicted RBP13.35□□□□□ -0.27
UBA1-201ENST00000335972 FAM69AQ5T7M9 428 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 KCTD20Q7Z5Y7 419 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 STT3BQ8TCJ2 826 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 CYYR1Q96J86 154 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 GPR137Q96N19 417 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 MRPL39Q9NYK5 338 aaKnown RBP13.35□□□□□ -0.27
UBA1-201ENST00000335972 STEAP1Q9UHE8 339 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 LRP12Q9Y561 859 aa13.35□□□□□ -0.27
UBA1-201ENST00000335972 A0A1B0GVI7 797 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 SLC22A23A1A5C7 686 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 CTDSPLO15194 276 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 DUX1O43812 170 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 RGS11O94810 467 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 AHSA1O95433 338 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 GTF2F2P13984 249 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 PI4KAP42356 2102 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 GPR139Q6DWJ6 353 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 JAGN1Q8N5M9 183 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 TMEM212A6NML5 194 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 CTAG2O75638 210 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 SLC22A5O76082 557 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 DCNP07585 359 aaKnown RBP13.34□□□□□ -0.27
UBA1-201ENST00000335972 SLC6A8P48029 635 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 PSMA6P60900 246 aaKnown RBP13.34□□□□□ -0.27
UBA1-201ENST00000335972 POU3F1Q03052 451 aaPredicted RBP13.34□□□□□ -0.27
UBA1-201ENST00000335972 BAIAP2L2Q6UXY1 529 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 ZNF767PQ75MW2 155 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 C17orf82Q86X59 251 aaPredicted RBP13.34□□□□□ -0.27
UBA1-201ENST00000335972 OR51S1Q8NGJ8 323 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 FAM3DQ96BQ1 224 aa13.34□□□□□ -0.27
UBA1-201ENST00000335972 AKIRIN1Q9H9L7 192 aaPredicted RBP13.34□□□□□ -0.27
UBA1-201ENST00000335972 TNRC18O15417 2968 aaPredicted RBP13.34□□□□□ -0.27
UBA1-201ENST00000335972 TRBV5-7A0A0A0MS05 114 aa13.33□□□□□ -0.27
UBA1-201ENST00000335972 M0QYG6 137 aa13.33□□□□□ -0.27
UBA1-201ENST00000335972 ACOT7O00154 380 aa13.33□□□□□ -0.27
UBA1-201ENST00000335972 CD1AP06126 327 aa13.33□□□□□ -0.27
UBA1-201ENST00000335972 LCN1P31025 176 aa13.33□□□□□ -0.27
UBA1-201ENST00000335972 POLR2HP52434 150 aaKnown RBP13.33□□□□□ -0.27
UBA1-201ENST00000335972 RNF4P78317 190 aa13.33□□□□□ -0.27
UBA1-201ENST00000335972 EXOSC2Q13868 293 aaKnown RBP13.33□□□□□ -0.27
UBA1-201ENST00000335972 GLYATL3Q5SZD4 288 aa13.33□□□□□ -0.27
UBA1-201ENST00000335972 SLC18B1Q6NT16 456 aa13.33□□□□□ -0.27
UBA1-201ENST00000335972 CHMP1BQ7LBR1 199 aa13.33□□□□□ -0.27
UBA1-201ENST00000335972 PLXDC1Q8IUK5 500 aa13.33□□□□□ -0.27
UBA1-201ENST00000335972 EPHA6Q9UF33 1036 aa13.33□□□□□ -0.27
UBA1-201ENST00000335972 DHDHQ9UQ10 334 aa13.33□□□□□ -0.27
UBA1-201ENST00000335972 IGLV1-36A0A0B4J1U3 117 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 A0A1B0GX78 115 aa13.33□□□□□ -0.28
UBA1-201ENST00000335972 LEUTXA8MZ59 168 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms