RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 HMGN3Q15651 99 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 PCGF3Q3KNV8 242 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 EXOSC6Q5RKV6 272 aaKnown RBP10.78□□□□□ -0.68
SHMT2-201ENST00000328923 TMEM69Q5SWH9 247 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 RIPPLY2Q5TAB7 128 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 ENPP7Q6UWV6 458 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 RSPO2Q6UXX9 243 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-201ENST00000328923 NDUFAF7Q7L592 441 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 IQCHQ86VS3 1027 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 OR4D11Q8NGI4 311 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 OR13C8Q8NGS7 320 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 OR5AK3PQ8NH89 298 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 TERB2Q8NHR7 220 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 C1orf216Q8TAB5 229 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 EXTL1Q92935 676 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 FAM46AQ96IP4 442 aaKnown RBP10.78□□□□□ -0.68
SHMT2-201ENST00000328923 G6PC3Q9BUM1 346 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 SGK2Q9HBY8 427 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 FBXO4Q9UKT5 387 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 A0A1B0GTI1 187 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 SOCS6O14544 535 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 SURF4O15260 269 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 ZNF749O43361 778 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 TRGC2P03986 189 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 SERPINA5P05154 406 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 CXCL1P09341 107 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 OR8U9P0C7N5 309 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 GSTM3P21266 225 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 CLDN12P56749 244 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 PIN1Q13526 163 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-201ENST00000328923 ARHGAP19Q14CB8 494 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 ENTPD8Q5MY95 495 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 RNF219Q5W0B1 726 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-201ENST00000328923 ZNF343Q6P1L6 599 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 BTNL3Q6UXE8 466 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 FCRLAQ7L513 359 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 TMEM173Q86WV6 379 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-201ENST00000328923 NPAS4Q8IUM7 802 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 EID2Q8N6I1 236 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 GPR32P1Q8NGA4 272 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 OR1J1Q8NGS3 322 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 OR8U1Q8NH10 309 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 ADGRG7Q96K78 797 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 GSX1Q9H4S2 264 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-201ENST00000328923 MYNNQ9NPC7 610 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 SERINC1Q9NRX5 453 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 TRPC4Q9UBN4 977 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 PADI1Q9ULC6 663 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 EXOGQ9Y2C4 368 aaKnown RBP10.78□□□□□ -0.68
SHMT2-201ENST00000328923 ADAM18Q9Y3Q7 739 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 HS3ST3B1Q9Y662 390 aa10.78□□□□□ -0.68
SHMT2-201ENST00000328923 UNC80Q8N2C7 3258 aa10.77□□□□□ -0.68
SHMT2-201ENST00000328923 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-201ENST00000328923 ZC3H12DA2A288 527 aaKnown RBP10.77□□□□□ -0.69
SHMT2-201ENST00000328923 GALTP07902 379 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 TLE4Q04727 773 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 LMAN2Q12907 356 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 RHEBQ15382 184 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 CHRDL2Q6WN34 429 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 SLC16A14Q7RTX9 510 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 ZNF573Q86YE8 665 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 MAML2Q8IZL2 1156 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-201ENST00000328923 TMEM99Q8N816 258 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 OR6N1Q8NGY5 312 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 OR14K1Q8NGZ2 314 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 HPSE2Q8WWQ2 592 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 ASB17Q8WXJ9 295 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 CLUHP3Q96NS8 147 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 CNN2Q99439 309 aaKnown RBP10.77□□□□□ -0.69
SHMT2-201ENST00000328923 RIOK2Q9BVS4 552 aaKnown RBP10.77□□□□□ -0.69
SHMT2-201ENST00000328923 ELOVL1Q9BW60 279 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 ACTRT3Q9BYD9 372 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 CHST11Q9NPF2 352 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 TRIM36Q9NQ86 728 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 IL36AQ9UHA7 158 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 ZNF223Q9UK11 482 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-201ENST00000328923 FOXJ3Q9UPW0 622 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 KIF26AQ9ULI4 1882 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-201ENST00000328923 HELZP42694 1942 aaKnown RBP10.77□□□□□ -0.69
SHMT2-201ENST00000328923 CBY3A6NI87 242 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 DVL1O14640 695 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 SOCS5O75159 536 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 TGFB1P01137 390 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 MMP7P09237 267 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-201ENST00000328923 CLTBP09497 229 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 OR4A8P0C604 315 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 HKR1P10072 659 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 CSNK1DP48730 415 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 B4GALNT1Q00973 533 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 HERPUD1Q15011 391 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 C1orf94Q6P1W5 598 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 NUDT10Q8NFP7 164 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 OR4K5Q8NGD3 323 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 RSC1A1Q92681 617 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 SEPT5Q99719 369 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-201ENST00000328923 ATG10Q9H0Y0 220 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 OR51I1Q9H343 314 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 GNG8Q9UK08 70 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 ICKQ9UPZ9 632 aa10.77□□□□□ -0.69
SHMT2-201ENST00000328923 TMED3Q9Y3Q3 217 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms