RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 MRPL22Q9NWU5 206 aaKnown RBP7.85□□□□□ -1.15
CLK1-201ENST00000321356 CDV3Q9UKY7 258 aaKnown RBP7.85□□□□□ -1.15
CLK1-201ENST00000321356 B9D1Q9UPM9 204 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 PLCL2Q9UPR0 1127 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 PIAS3Q9Y6X2 628 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 CACNA1CQ13936 2221 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 THADAQ6YHU6 1953 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 FXYD6-FXYD2A0A087WZ82 144 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 PRSS37A4D1T9 235 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 FITM1A5D6W6 292 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 B4DGG1 531 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 KRBOX1C9JBD0 128 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 H3BUI4 141 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 TRIM77I1YAP6 450 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 GOSR2O14653 212 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 DOK2O60496 412 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 ICOSLGO75144 302 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 PNPP00491 289 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 IGLV3-19P01714 112 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 LPLP06858 475 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 FGF2P09038 288 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 THEGLP0DJG4 465 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 CTSEP14091 401 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 RPA2P15927 270 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 IGFBP3P17936 291 aaPredicted RBP7.85□□□□□ -1.15
CLK1-201ENST00000321356 FSTP19883 344 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 CD1CP29017 333 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 NUP62P37198 522 aaPredicted RBP7.85□□□□□ -1.15
CLK1-201ENST00000321356 CENPAP49450 140 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 NUBP1P53384 320 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 ACTBP60709 375 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 UBE2MP61081 183 aaKnown RBP7.85□□□□□ -1.15
CLK1-201ENST00000321356 ACTG1P63261 375 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 OC90Q02509 493 aaPredicted RBP7.85□□□□□ -1.15
CLK1-201ENST00000321356 GK2Q14410 553 aaPredicted RBP7.85□□□□□ -1.15
CLK1-201ENST00000321356 KCNAB1Q14722 419 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 SGCBQ16585 318 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 MEP1BQ16820 701 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 ODF4Q2M2E3 257 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 TUSC1Q2TAM9 212 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 PXDC1Q5TGL8 231 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 C1QL3Q5VWW1 255 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 KIAA0895LQ68EN5 471 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 ZNF660Q6AZW8 331 aaPredicted RBP7.85□□□□□ -1.15
CLK1-201ENST00000321356 TMEM225Q6GV28 225 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 TSSK4Q6SA08 328 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 GSG1LQ6UXU4 331 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 CDH26Q8IXH8 852 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 GABRG1Q8N1C3 465 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 EIF4E3Q8N5X7 224 aaKnown RBP7.85□□□□□ -1.15
CLK1-201ENST00000321356 METTL27Q8N6F8 245 aaPredicted RBP7.85□□□□□ -1.15
CLK1-201ENST00000321356 TMEM229BQ8NBD8 167 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 OR1J4Q8NGS1 313 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 ZNF563Q8TA94 476 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 LHFPL5Q8TAF8 219 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 ADIPOR1Q96A54 375 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 DPYSL5Q9BPU6 564 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 LRRC61Q9BV99 259 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 PTDSS2Q9BVG9 487 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 SHARPINQ9H0F6 387 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 ARL6Q9H0F7 186 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 FXYD6Q9H0Q3 95 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 KCNK15Q9H427 330 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 VSX1Q9NZR4 365 aaPredicted RBP7.85□□□□□ -1.15
CLK1-201ENST00000321356 MED11Q9P086 117 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 MMP17Q9ULZ9 603 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 SLC22A13Q9Y226 551 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 IGKV3D-11A0A0A0MRZ8 115 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 A0A1W2PPC1 479 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 A0A1W2PQD3 144 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 H3BSH0 61 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 CDK2AP1O14519 115 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 XKRYO14609 159 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 NPIPB7O75200 414 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 PMS2P2O95744 297 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 DDAH2O95865 285 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 MT-ATP6P00846 226 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 FBXO45P0C2W1 286 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 CXCR1P25024 350 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 MPGP29372 298 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 RORAP35398 523 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 FASLGP48023 281 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 MAZP56270 477 aaKnown RBP7.84□□□□□ -1.15
CLK1-201ENST00000321356 GMFBP60983 142 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 RPL27P61353 136 aaKnown RBP7.84□□□□□ -1.15
CLK1-201ENST00000321356 INSM1Q01101 510 aaPredicted RBP7.84□□□□□ -1.15
CLK1-201ENST00000321356 TOMM34Q15785 309 aaPredicted RBP7.84□□□□□ -1.15
CLK1-201ENST00000321356 ACKR1Q16570 336 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 LY6G6FQ5SQ64 297 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 SLC18B1Q6NT16 456 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 TMEM81Q6P7N7 255 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 SLC35D2Q76EJ3 337 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 MAMDC2Q7Z304 686 aaPredicted RBP7.84□□□□□ -1.15
CLK1-201ENST00000321356 HSD17B13Q7Z5P4 300 aaPredicted RBP7.84□□□□□ -1.15
CLK1-201ENST00000321356 PARGQ86W56 976 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 CATSPERDQ86XM0 798 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 FAM160A2Q8N612 972 aaPredicted RBP7.84□□□□□ -1.15
CLK1-201ENST00000321356 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.84□□□□□ -1.15
CLK1-201ENST00000321356 OR5M9Q8NGP3 310 aa7.84□□□□□ -1.15
CLK1-201ENST00000321356 OR6K3Q8NGY3 331 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms