RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 ZFP64Q9NPA5 681 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 CCDC59Q9P031 241 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 TIMM10BQ9Y5J6 103 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 CACNA1IQ9P0X4 2223 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 TEX13DA0A0J9YY54 714 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 IL1AP01583 271 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 MAP2K3P46734 347 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 CFHR1Q03591 330 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 SKP2Q13309 424 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 NTRK2Q16620 822 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 SLC35D2Q76EJ3 337 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 SLC16A9Q7RTY1 509 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 ATG4DQ86TL0 474 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 C9orf40Q8IXQ3 194 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 GJC3Q8NFK1 279 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 OR5AK2Q8NH90 309 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 TMEM171Q8WVE6 324 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 ADIPOR1Q96A54 375 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 HAO2Q9NYQ3 351 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 KCNN3Q9UGI6 736 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 THADAQ6YHU6 1953 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 HEATR5BQ9P2D3 2071 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 SLC19A2O60779 497 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 GABARAPO95166 117 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 OPN1LWP04000 364 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 SERPINA5P05154 406 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 MRPL3P09001 348 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF17P17021 662 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 CRMP1Q14194 572 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 CCDC92Q53HC0 331 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 IL17RDQ8NFM7 739 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 GPR119Q8TDV5 335 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 H1FXQ92522 213 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 STEAP1Q9UHE8 339 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 ITGB1BP2Q9UKP3 347 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 ANKRD33BA6NCL7 494 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 NDUFA5Q16718 116 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 ODF4Q2M2E3 257 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 OLIG3Q7RTU3 272 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 ADPRHL1Q8NDY3 354 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 SLC39A7Q92504 469 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 OXGR1Q96P68 337 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 PLA2G3Q9NZ20 509 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 ERRFI1Q9UJM3 462 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 TRIM64CA6NLI5 447 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 SLC33A1O00400 549 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 SLC16A7O60669 478 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 BIDP55957 195 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 MLF1P58340 268 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 FUT5Q11128 374 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 RAB35Q15286 201 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 PRAMEF17Q5VTA0 474 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 ESPNLQ6ZVH7 1005 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 PXKQ7Z7A4 578 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 LHFPL3Q86UP9 236 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 LACC1Q8IV20 430 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 UBASH3BQ8TF42 649 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 WDR76Q9H967 626 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 SCP2D1Q9UJQ7 156 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 CMAHPQ9Y471 501 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 METTL15A6NJ78 407 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 SBK2P0C263 348 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 SMIM18P0DKX4 95 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 GABRA5P31644 462 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 FABP6P51161 128 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 SWI5Q1ZZU3 235 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 AWAT2Q6E213 333 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 RGS7BPQ6MZT1 257 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 MRGPREQ86SM8 312 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 CISD2Q8N5K1 135 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF417Q8TAU3 575 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 SLCO1C1Q9NYB5 712 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 GPR52Q9Y2T5 361 aa7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 TDRD6O60522 2096 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-201ENST00000317968 TRBV2A0A0J9YWF9 115 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 ANKRD34BA5PLL1 514 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 DNASE1P24855 282 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 MAP2K4P45985 399 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 B3GNTL1Q67FW5 361 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 KLBQ86Z14 1044 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 NANOGP1Q8N7R0 232 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 SPERTQ8NA61 448 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 ZG16BQ96DA0 208 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 TEAD3Q99594 435 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 SNTG1Q9NSN8 517 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 DAPK2Q9UIK4 370 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 OSGIN2Q9Y236 505 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 NEUROG3Q9Y4Z2 214 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 CEPT1Q9Y6K0 416 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 PLXNB3Q9ULL4 1909 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 GABRR1P24046 479 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 GNRHRP30968 328 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 RAC1P63000 192 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF770Q6IQ21 691 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF322Q6U7Q0 402 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 GTPBP8Q8N3Z3 284 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 LRRC18Q8N456 261 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 CCDC71LQ8N9Z2 235 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 PIGCQ92535 297 aa7.73□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF701Q9NV72 531 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms