RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 DUX4L2P0CJ85 424 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 DUX4L3P0CJ86 424 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 DUX4L4P0CJ87 422 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 DUX4L5P0CJ88 424 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 DUX4L6P0CJ89 424 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 DUX4L7P0CJ90 424 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 BDKRB2P30411 391 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 GABRA3P34903 492 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 MZT2AQ6P582 158 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 OLIG3Q7RTU3 272 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 RBM45Q8IUH3 476 aaKnown RBP13.34□□□□□ -0.27
HOXA3-201ENST00000317201 METTL27Q8N6F8 245 aaPredicted RBP13.34□□□□□ -0.27
HOXA3-201ENST00000317201 ZNF615Q8N8J6 731 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 ZG16BQ96DA0 208 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 BSCL2Q96G97 398 aaPredicted RBP13.34□□□□□ -0.27
HOXA3-201ENST00000317201 WFDC6Q9BQY6 131 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 GINS4Q9BRT9 223 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 DUX4Q9UBX2 424 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 KRT33AO76009 404 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 NID1P14543 1247 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 AVPR2P30518 371 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 OR1D4P47884 311 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 CASP12Q6UXS9 341 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 CD300LDQ6UXZ3 194 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 SKA3Q8IX90 412 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 NEIL3Q8TAT5 605 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 C3orf49Q96BT1 292 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 PTCHD1Q96NR3 888 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 METTL9Q9H1A3 318 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 OR10A5Q9H207 317 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 SLC25A32Q9H2D1 315 aa13.34□□□□□ -0.27
HOXA3-201ENST00000317201 SIDT1Q9NXL6 827 aaKnown RBP13.34□□□□□ -0.27
HOXA3-201ENST00000317201 IGLV3-12A0A075B6K2 115 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 NTN3O00634 580 aaPredicted RBP13.33□□□□□ -0.27
HOXA3-201ENST00000317201 ARPC1BO15143 372 aaKnown RBP13.33□□□□□ -0.27
HOXA3-201ENST00000317201 FMO6PO60774 539 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 TXNDC12O95881 172 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 CCR9P51686 369 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 RAB4BP61018 213 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 MINDY4Q4G0A6 757 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 BEX5Q5H9J7 111 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 KRBOX4Q5JUW0 171 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 ZNF836Q6ZNA1 936 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 PRSS45Q7RTY3 260 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 ARMC10Q8N2F6 343 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 OR52B4Q8NGK2 314 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 ISOC2Q96AB3 205 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 ZNF75AQ96N20 296 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 G6PC3Q9BUM1 346 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 TSPAN10Q9H1Z9 355 aaPredicted RBP13.33□□□□□ -0.27
HOXA3-201ENST00000317201 SIRT7Q9NRC8 400 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 RHCGQ9UBD6 479 aa13.33□□□□□ -0.27
HOXA3-201ENST00000317201 TRBV4-1A0A0J9YWV2 114 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 hCG_1809904A0A1W2PP81 198 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 A0A1W2PR64 198 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 A0A1W2PRV1 198 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 NME6O75414 186 aaPredicted RBP13.33□□□□□ -0.28
HOXA3-201ENST00000317201 SLC25A12O75746 678 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 IL33O95760 270 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 CLPSP04118 112 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 PITPNBP48739 271 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 SNTB2Q13425 540 aaKnown RBP13.33□□□□□ -0.28
HOXA3-201ENST00000317201 ELAVL1Q15717 326 aaKnown RBP13.33□□□□□ -0.28
HOXA3-201ENST00000317201 THEM4Q5T1C6 240 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 PLPP5Q8NEB5 264 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 CCDC74BQ96LY2 380 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 GAL3ST4Q96RP7 486 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 ZNF559Q9BR84 538 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 TSSK6Q9BXA6 273 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 TCF7L1Q9HCS4 588 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 Q9N2J8 555 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 MAN2C1Q9NTJ4 1040 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 RARRES3Q9UL19 164 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 ZMIZ1Q9ULJ6 1067 aa13.33□□□□□ -0.28
HOXA3-201ENST00000317201 A6NLC8 198 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 HIST1H2ABP04908 130 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 EPXP11678 715 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 DHODHQ02127 395 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 PIN1Q13526 163 aaPredicted RBP13.32□□□□□ -0.28
HOXA3-201ENST00000317201 ARHGAP40Q5TG30 622 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 RAB12Q6IQ22 244 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 PAPD4Q6PIY7 484 aaKnown RBP13.32□□□□□ -0.28
HOXA3-201ENST00000317201 ESPNLQ6ZVH7 1005 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 HIST3H2AQ7L7L0 130 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 LRRTM1Q86UE6 522 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 SLITRK4Q8IW52 837 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 AQP11Q8NBQ7 271 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 OR5M1Q8NGP8 315 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 OR56B4Q8NH76 319 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 PTPMT1Q8WUK0 201 aaPredicted RBP13.32□□□□□ -0.28
HOXA3-201ENST00000317201 HIST1H2ACQ93077 130 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 HIST1H2BAQ96A08 127 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 MFFQ9GZY8 342 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 MEPEQ9NQ76 525 aaPredicted RBP13.32□□□□□ -0.28
HOXA3-201ENST00000317201 ADAMTS9Q9P2N4 1935 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 TMEM72A0PK05 275 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 RFPL4AA6NLU0 287 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 C17orf105B2RV13 164 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 RFPL4AL1F8VTS6 287 aa13.32□□□□□ -0.28
HOXA3-201ENST00000317201 GASTP01350 101 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms