RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 FAM186AA6NE01 2351 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 NAP1L6A6NFF2 107 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 DDAH2O95865 285 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 HOXB9P17482 250 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-201ENST00000314191 GABRB1P18505 474 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 CD300CQ08708 224 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 EXT1Q16394 746 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 BPIFB2Q8N4F0 458 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 MFSD8Q8NHS3 518 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 SRRQ9GZT4 340 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 MIXL1Q9H2W2 232 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 MEMO1Q9Y316 297 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 DOCK10Q96BY6 2186 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 B4DXG7 233 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 HERV-K104P61576 105 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 HSF1Q00613 529 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 IRF3Q14653 427 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 MAFAQ8NHW3 353 aaPredicted RBP5.61□□□□□ -1.51
PRKDC-201ENST00000314191 PIGCQ92535 297 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 SLAMF6Q96DU3 332 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 PIGQQ9BRB3 760 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 PCDHB16Q9NRJ7 776 aa5.61□□□□□ -1.51
PRKDC-201ENST00000314191 ICAM2P13598 275 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 CDK2P24941 298 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 CARD18P57730 90 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 UBE2NP61088 152 aaKnown RBP5.6□□□□□ -1.51
PRKDC-201ENST00000314191 IFITM3Q01628 133 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 GALNT11Q8NCW6 608 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 OR2G2Q8NGZ5 317 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 PCNPQ8WW12 178 aaKnown RBP5.6□□□□□ -1.51
PRKDC-201ENST00000314191 FOXRED1Q96CU9 486 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-201ENST00000314191 LOXL2Q9Y4K0 774 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 WIF1Q9Y5W5 379 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 IGHEP01854 428 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 CD79AP11912 226 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 SELENBP1Q13228 472 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 SLC36A2Q495M3 483 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 SLC22A6Q4U2R8 563 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 CCDC36Q8IYA8 594 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 SMIM19Q96E16 107 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 LRFN5Q96NI6 719 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 SELENOIQ9C0D9 397 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 QPCTLQ9NXS2 382 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 TAS2R4Q9NYW5 299 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 ARPC5O15511 151 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 CCR9P51686 369 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 ASAH1Q13510 395 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 MOB3CQ70IA8 216 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 ANKRD37Q7Z713 158 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 ANGPTL5Q86XS5 388 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 ST8SIA1Q92185 356 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 FYTTD1Q96QD9 318 aaKnown RBP5.6□□□□□ -1.51
PRKDC-201ENST00000314191 CDX2Q99626 313 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-201ENST00000314191 ABHD6Q9BV23 337 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 FLVCR2Q9UPI3 526 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 IFITM5A6NNB3 132 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 GABREP78334 506 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 UBE2NLQ5JXB2 153 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 WDR88Q6ZMY6 472 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 D2HGDHQ8N465 521 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 TRMT61AQ96FX7 289 aaKnown RBP5.6□□□□□ -1.51
PRKDC-201ENST00000314191 TXNDC15Q96J42 360 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 BARHL1Q9BZE3 327 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 ADGRL4Q9HBW9 690 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 FBXO9Q9UK97 447 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-201ENST00000314191 DOPEY2Q9Y3R5 2298 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 SMLR1H3BR10 107 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 M0QYG6 137 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 CCL4P13236 92 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 FUT7Q11130 342 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.6□□□□□ -1.51
PRKDC-201ENST00000314191 EMC4Q5J8M3 183 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 TRAPPC6BQ86SZ2 158 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 ZBTB8AQ96BR9 441 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 CPNE2Q96FN4 548 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-201ENST00000314191 ZNF845Q96IR2 970 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-201ENST00000314191 TMEM43Q9BTV4 400 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 JAM3Q9BX67 310 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 CALHM2Q9HA72 323 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 FAM166BA8MTA8 275 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 SC5DO75845 299 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 FXYD4P59646 89 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 BEX5Q5H9J7 111 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 STEAP1BQ6NZ63 245 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 C6orf15Q6UXA7 325 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-201ENST00000314191 SLC25A43Q8WUT9 341 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-201ENST00000314191 THOC3Q96J01 351 aaKnown RBP5.6□□□□□ -1.51
PRKDC-201ENST00000314191 TXNIPQ9H3M7 391 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 CD53P19397 219 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 BDKRB2P30411 391 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 SEC61A1P61619 476 aaKnown RBP5.6□□□□□ -1.51
PRKDC-201ENST00000314191 GRK1Q15835 563 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 ZNF813Q6ZN06 617 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 IL17RDQ8NFM7 739 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 OR2M2Q96R28 347 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 SLC22A11Q9NSA0 550 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 PARPBPQ9NWS1 579 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 RABL2AQ9UBK7 228 aaPredicted RBP5.6□□□□□ -1.51
PRKDC-201ENST00000314191 RABL2BQ9UNT1 228 aa5.6□□□□□ -1.51
PRKDC-201ENST00000314191 LOC107986453A0A1B0GWG9 222 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms