RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 CEBPGP53567 150 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 CRYBA2P53672 197 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 DLX5P56178 289 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 TMEM44Q2T9K0 475 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 LIN52Q52LA3 116 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 MRPL2Q5T653 305 aaKnown RBP7.38□□□□□ -1.23
CHD6-201ENST00000309279 PRICKLE2Q7Z3G6 844 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 HMGN2P46Q86SG4 172 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 PATL1Q86TB9 770 aaKnown RBP7.38□□□□□ -1.23
CHD6-201ENST00000309279 MICU2Q8IYU8 434 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 ENTHD1Q8IYW4 607 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 DEFB107AQ8IZN7 70 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 CLIP4Q8N3C7 705 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 FAM83FQ8NEG4 500 aaPredicted RBP7.38□□□□□ -1.23
CHD6-201ENST00000309279 BHLHE22Q8NFJ8 381 aaPredicted RBP7.38□□□□□ -1.23
CHD6-201ENST00000309279 OR6Q1Q8NGQ2 317 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 OR5W2Q8NH69 310 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 OCC1Q8TAD7 63 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 GPR119Q8TDV5 335 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 PGAM5Q96HS1 289 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 SIGLEC11Q96RL6 698 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 KLHDC3Q9BQ90 382 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 MAGT1Q9H0U3 335 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 DEFB127Q9H1M4 99 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 MMP27Q9H306 513 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 NELFAQ9H3P2 528 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 TMEM185BQ9H7F4 350 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 RLIMQ9NVW2 624 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 TAS2R1Q9NYW7 299 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 SEC14L3Q9UDX4 400 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 USP22Q9UPT9 525 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 ZNF443Q9Y2A4 671 aaPredicted RBP7.38□□□□□ -1.23
CHD6-201ENST00000309279 ZNF281Q9Y2X9 895 aa7.38□□□□□ -1.23
CHD6-201ENST00000309279 MYO18BQ8IUG5 2567 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 HIVEP3Q5T1R4 2406 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 FLNCQ14315 2725 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 UBR5O95071 2799 aaPredicted RBP7.37□□□□□ -1.23
CHD6-201ENST00000309279 TRGV5A0A0B4J1U4 118 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 PLSCR5A0PG75 271 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 C7orf72A4D263 438 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 SLC35F4A4IF30 521 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 ANKUB1A6NFN9 424 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 ZNF98A6NK75 572 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 MARCH11A6NNE9 402 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 FAAHO00519 579 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 TRAPPC6AO75865 159 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 HTR1EP28566 365 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 AQP1P29972 269 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 DCTDP32321 178 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 CDH15P55291 814 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 B3GALT5-AS1P59052 145 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 MXRA7P84157 204 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 GALK2Q01415 458 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 ACSM1Q08AH1 577 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 DUSP7Q16829 419 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 NDUFAF6Q330K2 333 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 ALKBH6Q3KRA9 238 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 EIPR1Q53HC9 387 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 FBLN7Q53RD9 439 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 SAMD4BQ5PRF9 694 aaKnown RBP7.37□□□□□ -1.23
CHD6-201ENST00000309279 DHRS4L2Q6PKH6 230 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 ZNF836Q6ZNA1 936 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 ZNF605Q86T29 641 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 IFNEQ86WN2 208 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 CCDC28AQ8IWP9 274 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 ARHGAP24Q8N264 748 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 CPEB3Q8NE35 698 aaKnown RBP7.37□□□□□ -1.23
CHD6-201ENST00000309279 OR5D18Q8NGL1 313 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 OR4C15Q8NGM1 316 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 NEIL3Q8TAT5 605 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 CNOT9Q92600 299 aaKnown RBP7.37□□□□□ -1.23
CHD6-201ENST00000309279 ZBTB8AQ96BR9 441 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 ZNF524Q96C55 264 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 SLC7A6OSQ96CW6 309 aaPredicted RBP7.37□□□□□ -1.23
CHD6-201ENST00000309279 SH3YL1Q96HL8 342 aaPredicted RBP7.37□□□□□ -1.23
CHD6-201ENST00000309279 ARMC7Q9H6L4 198 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 GP6Q9HCN6 339 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 DNAJB12Q9NXW2 375 aaKnown RBP7.37□□□□□ -1.23
CHD6-201ENST00000309279 ADA2Q9NZK5 511 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 GMPR2Q9P2T1 348 aaKnown RBP7.37□□□□□ -1.23
CHD6-201ENST00000309279 POFUT2Q9Y2G5 429 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 ZNF835Q9Y2P0 537 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 TNFRSF18Q9Y5U5 241 aa7.37□□□□□ -1.23
CHD6-201ENST00000309279 A0A1B0GTH9 108 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 ABCD4O14678 606 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 RGS13O14921 159 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 ZNF208O43345 1280 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 TPST1O60507 370 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 NTN1O95631 604 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 EPPINO95925 133 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 C8BP07358 591 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 ZNF17P17021 662 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 KDELR2P33947 212 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 EIF1P41567 113 aaKnown RBP7.36□□□□□ -1.23
CHD6-201ENST00000309279 SLC6A8P48029 635 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 RAB11AP62491 216 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 TOP3AQ13472 1001 aaPredicted RBP7.36□□□□□ -1.23
CHD6-201ENST00000309279 RAB11BQ15907 218 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 SSX2Q16385 188 aa7.36□□□□□ -1.23
CHD6-201ENST00000309279 KCNMB1Q16558 191 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms