RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SHISA8B8ZZ34 492 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 OIP5O43482 229 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 ST6GAL1P15907 406 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 ZXDAP98168 799 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 C2orf76Q3KRA6 126 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 ZNF485Q8NCK3 441 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 EVA1AQ9H8M9 152 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 CES1P1Q9UKY3 287 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 CA14Q9ULX7 337 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 EDARQ9UNE0 448 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 SCDO00767 359 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 PPM1BO75688 479 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 AKR7A3O95154 331 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 CD2P06729 351 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 HOXB5P09067 269 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 TACR3P29371 465 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 FZD5Q13467 585 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 RAB11BQ15907 218 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 PWWP2BQ6NUJ5 590 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 ULK3Q6PHR2 472 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 MED25Q71SY5 747 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 FAM160A2Q8N612 972 aaPredicted RBP13.23□□□□□ -0.29
PTPN9-201ENST00000306726 DCUN1D4Q92564 292 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 ZNF416Q9BWM5 594 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 TPSD1Q9BZJ3 242 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 PRDM6Q9NQX0 595 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 ADAM29Q9UKF5 820 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 TMEM200CA6NKL6 621 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 AIPO00170 330 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 IGKV1D-16P01601 117 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 NR0B1P51843 470 aaKnown RBP13.23□□□□□ -0.29
PTPN9-201ENST00000306726 IL13RA1P78552 427 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 DUSP8Q13202 625 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 RSPO4Q2I0M5 234 aaPredicted RBP13.23□□□□□ -0.29
PTPN9-201ENST00000306726 Q499Y3 187 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 TMEM52BQ4KMG9 183 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 CLDN23Q96B33 292 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 FAM3DQ96BQ1 224 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 KTI12Q96EK9 354 aaPredicted RBP13.23□□□□□ -0.29
PTPN9-201ENST00000306726 SLC38A3Q99624 504 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 TBL1XR1Q9BZK7 514 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 TAS2R4Q9NYW5 299 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 VSX1Q9NZR4 365 aaPredicted RBP13.23□□□□□ -0.29
PTPN9-201ENST00000306726 CPNE7Q9UBL6 633 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 B9D1Q9UPM9 204 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 ZNF736B4DX44 427 aaPredicted RBP13.23□□□□□ -0.29
PTPN9-201ENST00000306726 AGR2O95994 175 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 PMP2P02689 132 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 EEF1A1P68104 462 aaKnown RBP13.23□□□□□ -0.29
PTPN9-201ENST00000306726 ZNF584Q8IVC4 421 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 LMAN1LQ9HAT1 526 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 ST6GALNAC2Q9UJ37 374 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 FOXJ3Q9UPW0 622 aa13.23□□□□□ -0.29
PTPN9-201ENST00000306726 TEX51A0A1B0GUA7 166 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 LINC00862A6NCI5 91 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 CLDN4O14493 209 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 IFNGR1P15260 489 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 ADRA2CP18825 462 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 RBMS2Q15434 407 aaKnown RBP13.22□□□□□ -0.29
PTPN9-201ENST00000306726 GLDNQ6ZMI3 551 aaPredicted RBP13.22□□□□□ -0.29
PTPN9-201ENST00000306726 SPEM1Q8N4L4 309 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 ZNF321PQ8N8H1 164 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 OR13C3Q8NGS6 347 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 GPR148Q8TDV2 347 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 MARC2Q969Z3 335 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 SERINC2Q96SA4 455 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 TIMP4Q99727 224 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 SOSTQ9BQB4 213 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 ZNF649Q9BS31 505 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 ST6GALNAC5Q9BVH7 336 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 RAB11FIP5Q9BXF6 653 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 SELENOIQ9C0D9 397 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 PCED1AQ9H1Q7 454 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 CHRDQ9H2X0 955 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 BANF2Q9H503 90 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.22□□□□□ -0.29
PTPN9-201ENST00000306726 H0YIG0 161 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 P2RY10O00398 339 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 SDCBPO00560 298 aaPredicted RBP13.22□□□□□ -0.29
PTPN9-201ENST00000306726 S100A6P06703 90 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 ALKBH1Q13686 389 aaKnown RBP13.22□□□□□ -0.29
PTPN9-201ENST00000306726 NKAIN2Q5VXU1 208 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 GALNT16Q8N428 558 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 OR13C9Q8NGT0 318 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 ISYNA1Q9NPH2 558 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 FRRS1LQ9P0K9 344 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 ZNF217O75362 1048 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 ZNF823P16415 610 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 SPINK2P20155 84 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 DPTQ07507 201 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 TOMM34Q15785 309 aaPredicted RBP13.22□□□□□ -0.29
PTPN9-201ENST00000306726 RNASE10Q5GAN6 216 aaKnown RBP13.22□□□□□ -0.29
PTPN9-201ENST00000306726 CDCP2Q5VXM1 449 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 ADAMTSL4Q6UY14 1074 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 Q6ZSR6 202 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 OR6V1Q8N148 313 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 GTPBP8Q8N3Z3 284 aaPredicted RBP13.22□□□□□ -0.29
PTPN9-201ENST00000306726 PXT1Q8NFP0 134 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 FAM131CQ96AQ9 280 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 ZBTB8AQ96BR9 441 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms