RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 CHD2O14647 1828 aaKnown RBP7.12□□□□□ -1.27
SCN9A-201ENST00000303354 IGHV3-43A0A0B4J1X8 118 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 D6RAR5 112 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 TMPRSS11DO60235 418 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 KCNK2O95069 426 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 PDGFBP01127 241 aaPredicted RBP7.12□□□□□ -1.27
SCN9A-201ENST00000303354 IGHV3-43DP0DP04 118 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 TBXA2RP21731 343 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 HOXA9P31269 272 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 ACKR1Q16570 336 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 GLYATL3Q5SZD4 288 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 GHSRQ92847 366 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 BIRC8Q96P09 236 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 YTHDF1Q9BYJ9 559 aaKnown RBP7.12□□□□□ -1.27
SCN9A-201ENST00000303354 C3orf80F5H4A9 247 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 B3GNT9Q6UX72 402 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 MBOAT2Q6ZWT7 520 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 ACOT13Q9NPJ3 140 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 P4HTMQ9NXG6 502 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 BABAM2Q9NXR7 383 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 CLEC2DQ9UHP7 191 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 ASB1Q9Y576 335 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 SPINT2O43291 252 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 DUSP1P28562 367 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 CAMK2BQ13554 666 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 C2orf76Q3KRA6 126 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 RGS7BPQ6MZT1 257 aaPredicted RBP7.12□□□□□ -1.27
SCN9A-201ENST00000303354 MFSD12Q6NUT3 480 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 C6orf89Q6UWU4 347 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 COMMD7Q86VX2 200 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 TSPYL5Q86VY4 417 aaPredicted RBP7.12□□□□□ -1.27
SCN9A-201ENST00000303354 SLC35F3Q8IY50 421 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 PPA2Q9H2U2 334 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 SDHAF2Q9NX18 166 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 CITO14578 2027 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 IGHV1OR15-9A0A0B4J2B8 117 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 TNFRSF10AO00220 468 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 SDCBPO00560 298 aaPredicted RBP7.12□□□□□ -1.27
SCN9A-201ENST00000303354 LYRM1O43325 122 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 FCMRO60667 390 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 TSPAN12O95859 305 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 HLA-AP01891 365 aaKnown RBP7.12□□□□□ -1.27
SCN9A-201ENST00000303354 FGF4P08620 206 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 ZNF93P35789 620 aaPredicted RBP7.12□□□□□ -1.27
SCN9A-201ENST00000303354 PMPCAQ10713 525 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 FOXF1Q12946 379 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 CLEC12BQ2HXU8 276 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 NUP188Q5SRE5 1749 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 THNSL2Q86YJ6 484 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 OR51D1Q8NGF3 324 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 ANKRD9Q96BM1 317 aaPredicted RBP7.12□□□□□ -1.27
SCN9A-201ENST00000303354 SPNS1Q9H2V7 528 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 OSGIN1Q9UJX0 560 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 DAPP1Q9UN19 280 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 IL7P13232 177 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 PI3P19957 117 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 CA5AP35218 305 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 OPRM1P35372 400 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 UBE2IP63279 158 aaKnown RBP7.12□□□□□ -1.27
SCN9A-201ENST00000303354 RAB35Q15286 201 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 AARDQ4LEZ3 155 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 TMPRSS11FQ6ZWK6 438 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 WFDC3Q8IUB2 231 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 OR7G1Q8NGA0 311 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 OR51F2Q8NH61 342 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 OR1L3Q8NH93 324 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 C16orf52Q8NHV5 167 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 BAHD1Q8TBE0 780 aaPredicted RBP7.12□□□□□ -1.27
SCN9A-201ENST00000303354 FNDC8Q8TC99 324 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 RSRP1Q9BUV0 290 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 RTL8AQ9BWD3 113 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 POMT1Q9Y6A1 747 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 CLEC2LP0C7M8 214 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 NME2P22392 152 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 TVP23CQ96ET8 276 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 PLK3Q9H4B4 646 aa7.12□□□□□ -1.27
SCN9A-201ENST00000303354 DSCR3O14972 297 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 FZD7O75084 574 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 SIX6O95475 246 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 HTR2CP28335 458 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 TRIM23P36406 574 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 HAAOP46952 286 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 KIAA1024LP59773 190 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 ACTBP60709 375 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 TRA2BP62995 288 aaKnown RBP7.11□□□□□ -1.27
SCN9A-201ENST00000303354 ACTG1P63261 375 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 AGERQ15109 404 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 DUSP7Q16829 419 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 RTL10Q7L3V2 364 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 C20orf196Q8IYI0 205 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 OR4M1Q8NGD0 313 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 MMP27Q9H306 513 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 NT5DC2Q9H857 520 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 ABCD4O14678 606 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 HPRP00739 348 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 OR5G3P0C626 314 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 MYF6P23409 242 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 RPL35P42766 123 aaKnown RBP7.11□□□□□ -1.27
SCN9A-201ENST00000303354 RTP5Q14D33 572 aa7.11□□□□□ -1.27
SCN9A-201ENST00000303354 PLAG1Q6DJT9 500 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms