RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 TMEM225Q6GV28 225 aa13.06□□□□□ -0.32
SMG8-201ENST00000300917 SLC18B1Q6NT16 456 aa13.06□□□□□ -0.32
SMG8-201ENST00000300917 ZNF544Q6NX49 715 aa13.06□□□□□ -0.32
SMG8-201ENST00000300917 METAP1DQ6UB28 335 aaPredicted RBP13.06□□□□□ -0.32
SMG8-201ENST00000300917 MISPQ8IVT2 679 aa13.06□□□□□ -0.32
SMG8-201ENST00000300917 WDSUB1Q8N9V3 476 aa13.06□□□□□ -0.32
SMG8-201ENST00000300917 STK35Q8TDR2 534 aa13.06□□□□□ -0.32
SMG8-201ENST00000300917 KIAA1143Q96AT1 154 aaPredicted RBP13.06□□□□□ -0.32
SMG8-201ENST00000300917 MRPL39Q9NYK5 338 aaKnown RBP13.06□□□□□ -0.32
SMG8-201ENST00000300917 V9GY05 133 aa13.06□□□□□ -0.32
SMG8-201ENST00000300917 LOC400499M0QZD8 3231 aa13.06□□□□□ -0.32
SMG8-201ENST00000300917 SYPP08247 313 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 NDUFAF7Q7L592 441 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 PLPP7Q8NBV4 271 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 EMC7Q9NPA0 242 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 CHST11Q9NPF2 352 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 SDHAF3Q9NRP4 125 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 SERINC1Q9NRX5 453 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 ZNF221Q9UK13 617 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 HTR3EA5X5Y0 456 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 NTN3O00634 580 aaPredicted RBP13.05□□□□□ -0.32
SMG8-201ENST00000300917 IGF2P01344 180 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 MT-ND4P03905 459 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 TCN2P20062 427 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 CCR6P51684 374 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 MFAP5Q13361 173 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 SLC17A1Q14916 467 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 RAET1LQ5VY80 246 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 OR11G2Q8NGC1 345 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 CHAC2Q8WUX2 184 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 OIT3Q8WWZ8 545 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 LRP12Q9Y561 859 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 ALG5Q9Y673 324 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 IGHV1-45A0A0A0MS14 117 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 NSG1A0A0A6YYJ2 146 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 LIPT2A6NK58 231 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 LMX1BO60663 402 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 DDOSTP39656 456 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 FAAP20Q6NZ36 180 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 GLB1L2Q8IW92 636 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 SCAIQ8N9R8 606 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 DTWD2Q8NBA8 298 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 C17orf50Q8WW18 174 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 KCTD12Q96CX2 325 aaKnown RBP13.05□□□□□ -0.32
SMG8-201ENST00000300917 C4orf45Q96LM5 186 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 OR8B4Q96RC9 309 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 CMKLR1Q99788 373 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 POLR1DQ9Y2S0 133 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 TMEM14AQ9Y6G1 99 aa13.05□□□□□ -0.32
SMG8-201ENST00000300917 SMLR1H3BR10 107 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 STK17BO94768 372 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 GAAP10253 952 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 SLC2A1P11166 492 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 COX6A1P12074 109 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 RBMS1P29558 406 aaKnown RBP13.04□□□□□ -0.32
SMG8-201ENST00000300917 ZFP36L1Q07352 338 aaKnown RBP13.04□□□□□ -0.32
SMG8-201ENST00000300917 SF3A2Q15428 464 aaKnown RBP13.04□□□□□ -0.32
SMG8-201ENST00000300917 MAMSTRQ6ZN01 415 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 TRILQ7L0X0 811 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 SIAH3Q8IW03 269 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 OR2M3Q8NG83 312 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 OR6F1Q8NGZ6 308 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 SYNPRQ8TBG9 265 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 ASB10Q8WXI3 467 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 TTC9Q92623 222 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 SLITRK2Q9H156 845 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 LNP1A1A4G5 178 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 RCVRNP35243 200 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 SLC23A3Q6PIS1 610 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 UNQ9370/PRO34162Q6UXP9 181 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 TOMM5Q8N4H5 51 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 MFSD8Q8NHS3 518 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 NEK6Q9HC98 313 aa13.04□□□□□ -0.32
SMG8-201ENST00000300917 CHCHD2Q9Y6H1 151 aaPredicted RBP13.04□□□□□ -0.32
SMG8-201ENST00000300917 MEIS3P1A6NDR6 274 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 CAPZA2P47755 286 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 NTRK2Q16620 822 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 BCL2L15Q5TBC7 163 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 SFRP4Q6FHJ7 346 aaPredicted RBP13.03□□□□□ -0.32
SMG8-201ENST00000300917 ZNF679Q8IYX0 411 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 BEST4Q8NFU0 473 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 OR51D1Q8NGF3 324 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 GPR148Q8TDV2 347 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 ELP5Q8TE02 316 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 TRIM63Q969Q1 353 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 DCBLD2Q96PD2 775 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 IER2Q9BTL4 223 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 NUDT15Q9NV35 164 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 OR5V1Q9UGF6 321 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 LOXL2Q9Y4K0 774 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 YKT6O15498 198 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 GIFP27352 417 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 FOLR3P41439 243 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 DNASE1L1P49184 302 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 GFOD2Q3B7J2 385 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 PYHIN1Q6K0P9 492 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 KCTD20Q7Z5Y7 419 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 TEX19Q8NA77 164 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 SLC25A38Q96DW6 304 aa13.03□□□□□ -0.32
SMG8-201ENST00000300917 KLK11Q9UBX7 282 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms