RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 LDLRAD3Q86YD5 345 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 DMRTC2Q8IXT2 367 aaPredicted RBP12.2□□□□□ -0.46
CTDP1-202ENST00000299543 SLC35F3Q8IY50 421 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 TEX19Q8NA77 164 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 GPBAR1Q8TDU6 330 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 TMEM106AQ96A25 262 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 C7orf50Q9BRJ6 194 aaKnown RBP12.2□□□□□ -0.46
CTDP1-202ENST00000299543 LMF2Q9BU23 707 aaKnown RBP12.2□□□□□ -0.46
CTDP1-202ENST00000299543 SYNDIG1Q9H7V2 258 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 MED11Q9P086 117 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 ASH2LQ9UBL3 628 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 SLC6A5Q9Y345 797 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 ABCD4O14678 606 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 ACHEP22303 614 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 RABIFP47224 123 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 LBX1P52954 281 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 ART1P52961 327 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 GFERP55789 205 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 PRPS1P60891 318 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 YPEL5P62699 121 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 S100A12P80511 92 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 C2orf68Q2NKX9 166 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 NKAIN2Q5VXU1 208 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 C5orf46Q6UWT4 87 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 Q6ZS52 159 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 RAB11FIP2Q7L804 512 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 PUSL1Q8N0Z8 303 aaKnown RBP12.19□□□□□ -0.46
CTDP1-202ENST00000299543 OR11G2Q8NGC1 345 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 PPP1R14AQ96A00 147 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 NXF5Q9H1B4 397 aaKnown RBP12.19□□□□□ -0.46
CTDP1-202ENST00000299543 WBP1LQ9NX94 342 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 PIPOXQ9P0Z9 390 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 MED12Q93074 2177 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 EFCAB7A8K855 629 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 CD14P08571 375 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 HOXC4P09017 264 aaPredicted RBP12.19□□□□□ -0.46
CTDP1-202ENST00000299543 TACR3P29371 465 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 LINC00303Q3SY05 128 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.19□□□□□ -0.46
CTDP1-202ENST00000299543 LPAR4Q99677 370 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 FRRS1LQ9P0K9 344 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 MRM2Q9UI43 246 aaKnown RBP12.19□□□□□ -0.46
CTDP1-202ENST00000299543 PRAMEF26H0Y7S4 382 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 GPRIN2O60269 458 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 OR6A2O95222 327 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 RPL18Q07020 188 aaKnown RBP12.19□□□□□ -0.46
CTDP1-202ENST00000299543 ZNF141Q15928 474 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 EXOSC6Q5RKV6 272 aaKnown RBP12.19□□□□□ -0.46
CTDP1-202ENST00000299543 MANEAQ5SRI9 462 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 FGD2Q7Z6J4 655 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 OR51D1Q8NGF3 324 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 ZNF524Q96C55 264 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 PFDN5Q99471 154 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 ICAM5Q9UMF0 924 aa12.19□□□□□ -0.46
CTDP1-202ENST00000299543 IGKV1D-42A0A075B6H8 117 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 TRAV8-7A0A075B6U6 113 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 ZNF705EA8MWA4 302 aaPredicted RBP12.18□□□□□ -0.46
CTDP1-202ENST00000299543 MCRIP1C9JLW8 97 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 CRYBA1P05813 215 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 CCKBRP32239 447 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 GPR3P46089 330 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 ALKBH1Q13686 389 aaKnown RBP12.18□□□□□ -0.46
CTDP1-202ENST00000299543 FZD2Q14332 565 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 CMIPQ8IY22 773 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 OR6V1Q8N148 313 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 KDM8Q8N371 416 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 FAM174AQ8TBP5 190 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 HAVCR2Q8TDQ0 301 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 LMX1AQ8TE12 382 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 CA5BP1Q8WTZ4 195 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 TSLPQ969D9 159 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 KLHDC7BQ96G42 594 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 TMEM231Q9H6L2 316 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 ANKRD10Q9NXR5 420 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 AKAP7Q9P0M2 348 aaPredicted RBP12.18□□□□□ -0.46
CTDP1-202ENST00000299543 ATXN7L1Q9ULK2 861 aaPredicted RBP12.18□□□□□ -0.46
CTDP1-202ENST00000299543 PLSCR5A0PG75 271 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 PMS2P1A4D2B8 440 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 EIF1BO60739 113 aaKnown RBP12.18□□□□□ -0.46
CTDP1-202ENST00000299543 EIF1P41567 113 aaKnown RBP12.18□□□□□ -0.46
CTDP1-202ENST00000299543 PTGFRP43088 359 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 P2RX1P51575 399 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 FOXL2P58012 376 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 AP3S2P59780 193 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 SKP1P63208 163 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 PCGF3Q3KNV8 242 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 LINC01590Q5TEZ4 76 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 HACD4Q5VWC8 232 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 PWWP2BQ6NUJ5 590 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 LINC00114Q6XXX2 140 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 GLB1L2Q8IW92 636 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 SPAG16Q8N0X2 631 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 ABCA7Q8IZY2 2146 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 SULT1C2O00338 296 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 SULT1B1O43704 296 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 ADRA2CP18825 462 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 DPP4P27487 766 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 S100A11P31949 105 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 PSMD4P55036 377 aaKnown RBP12.18□□□□□ -0.46
CTDP1-202ENST00000299543 LTBQ06643 244 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms