RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 ESPNLQ6ZVH7 1005 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 CPEB2Q7Z5Q1 589 aaKnown RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 HMGN2P46Q86SG4 172 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 BAGE3Q86Y29 109 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 BAGE2Q86Y30 109 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 EGFL6Q8IUX8 553 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ENTHD1Q8IYW4 607 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 LRRC18Q8N456 261 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 OR1N1Q8NGS0 311 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 OR13C8Q8NGS7 320 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 TFAP2CQ92754 450 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 TPPP3Q9BW30 176 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 IKZF5Q9H5V7 419 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 TXNL4BQ9NX01 149 aaKnown RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 PPT2Q9UMR5 302 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 GPR55Q9Y2T6 319 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 G3V2L1 256 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 AGPAT2O15120 278 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ABLIM3O94929 683 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 SFTPCP11686 197 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 LAP3P28838 519 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 CCR7P32248 378 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 DPTQ07507 201 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 SIX1Q15475 284 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 KDM4DQ6B0I6 523 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 C17orf107Q6ZR85 190 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 SLC36A1Q7Z2H8 476 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 CPNE8Q86YQ8 564 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 EXD3Q8N9H8 876 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF384Q8TF68 577 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 DUSP19Q8WTR2 217 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 FAM3DQ96BQ1 224 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 BORCS6Q96GS4 357 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 GSTO2Q9H4Y5 243 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 THYN1Q9P016 225 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 C19orf53Q9UNZ5 99 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 KCPQ6ZWJ8 1503 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 MYH1P12882 1939 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 FAM171A2A8MVW0 826 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 E5RGE8 158 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 NUDT7P0C024 238 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 CD82P27701 267 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 CEACAM3P40198 252 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ERHP84090 104 aaKnown RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 HSF1Q00613 529 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ETFRF1Q6IPR1 90 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 RSPO2Q6UXX9 243 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 SLCO4C1Q6ZQN7 724 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 NUFIP2Q7Z417 695 aaKnown RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ABI3BPQ7Z7G0 1075 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 SYT9Q86SS6 491 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ARRDC2Q8TBH0 407 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 PAAF1Q9BRP4 392 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 TMEM38AQ9H6F2 299 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 A4GALTQ9NPC4 353 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 DIMT1Q9UNQ2 313 aaKnown RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 PTGDR2Q9Y5Y4 395 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 MYH8P13535 1937 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 PIK3C2AO00443 1686 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ATP6V1G2-DDX39BF2Z307 99 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 PTAFRP25105 342 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 GIFP27352 417 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 GJA5P36382 358 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 HNRNPFP52597 415 aaKnown RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 THEM4Q5T1C6 240 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 OR5M10Q6IEU7 315 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF546Q86UE3 836 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 TTC9BQ8N6N2 239 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 SUMF1Q8NBK3 374 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 HSD17B11Q8NBQ5 300 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 LGALS14Q8TCE9 139 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 DYNC2LI1Q8TCX1 351 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 RNF141Q8WVD5 230 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 CCDC74AQ96AQ1 378 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 PINX1Q96BK5 328 aaKnown RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ZNF251Q9BRH9 671 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 RBFOX1Q9NWB1 397 aaKnown RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 MN1Q10571 1320 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 TMEM72A0PK05 275 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ANKRD61A6NGH8 418 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 I6L893 689 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 K7EQS6 105 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 SIAH2O43255 324 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 MITFO75030 526 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 SLCO2B1O94956 709 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 TSPAN12O95859 305 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ORM1P02763 201 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ATP1B1P05026 303 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 F13BP05160 661 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 PPICP45877 212 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 OR10A3P58181 314 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 C19orf35Q6ZS72 473 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 ANKRD33Q7Z3H0 272 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 OR8U1Q8NH10 309 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 MAFAQ8NHW3 353 aaPredicted RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 DEDD2Q8WXF8 326 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 QRSL1Q9H0R6 528 aaKnown RBP3.74□□□□□ -1.81
SCN3A-201ENST00000283254 AAMDCQ9H7C9 122 aa3.74□□□□□ -1.81
SCN3A-201ENST00000283254 PCDHGA7Q9Y5G6 932 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms