RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 C9orf50Q5SZB4 431 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 NAXDQ8IW45 347 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 ZNF454Q8N9F8 522 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 SEMA6DQ8NFY4 1073 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 TAS2R4Q9NYW5 299 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 PTTG3PQ9NZH4 202 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 SSUH2Q9Y2M2 353 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 ANKRD61A6NGH8 418 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 HOXC11O43248 304 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-201ENST00000275233 EDIL3O43854 480 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 GLI4P10075 376 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 SRMP19623 302 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 HSF1Q00613 529 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 ACSM1Q08AH1 577 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 BARHL1Q9BZE3 327 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 ZNF436Q9C0F3 470 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-201ENST00000275233 SLC39A9Q9NUM3 307 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 PSORS1C1Q9UIG5 152 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 IGLV3-10A0A075B6K4 115 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 SIRPB1O00241 398 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 OR2J2O76002 312 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 FOLR1P15328 257 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 IL3RAP26951 378 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 UBE2KP61086 200 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 VASH2Q86V25 355 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 MAML2Q8IZL2 1156 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-201ENST00000275233 LINC01599Q8WXQ3 324 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 FAM3DQ96BQ1 224 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 INTS12Q96CB8 462 aaKnown RBP10.89□□□□□ -0.67
SHPRH-201ENST00000275233 BTAF1O14981 1849 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 SLX4Q8IY92 1834 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 UBBP0CG47 229 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 ACTBL2Q562R1 376 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 LRRC56Q8IYG6 542 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-201ENST00000275233 OR56B4Q8NH76 319 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 C11orf40Q8WZ69 217 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 FGF14Q92915 247 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 UHRF2Q96PU4 802 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 ZDHHC5Q9C0B5 715 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 PARP12Q9H0J9 701 aaKnown RBP10.89□□□□□ -0.67
SHPRH-201ENST00000275233 MED17Q9NVC6 651 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 NECAP2Q9NVZ3 263 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 MTCH1Q9NZJ7 389 aa10.89□□□□□ -0.67
SHPRH-201ENST00000275233 CRYM-AS1A6NIL9 109 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 TXNL1O43396 289 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 YIF1AO95070 293 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 SCG5P05408 212 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 AADACP22760 399 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 ELAVL1Q15717 326 aaKnown RBP10.88□□□□□ -0.67
SHPRH-201ENST00000275233 GRINAQ7Z429 371 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 S100A7AQ86SG5 101 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 MED18Q9BUE0 208 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 GPR55Q9Y2T6 319 aaPredicted RBP10.88□□□□□ -0.67
SHPRH-201ENST00000275233 PRELID3BQ9Y3B1 194 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 RPS10-NUDT3A0A1W2PQS6 291 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 FGF17O60258 216 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 GLCEO94923 617 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 TRHRP34981 398 aaPredicted RBP10.88□□□□□ -0.67
SHPRH-201ENST00000275233 RPS10P46783 165 aaKnown RBP10.88□□□□□ -0.67
SHPRH-201ENST00000275233 PPT1P50897 306 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 RPL27P61353 136 aaKnown RBP10.88□□□□□ -0.67
SHPRH-201ENST00000275233 GRB2P62993 217 aaKnown RBP10.88□□□□□ -0.67
SHPRH-201ENST00000275233 DPPA2Q7Z7J5 298 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 OR51E1Q8TCB6 317 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 MYEOVQ96EZ4 313 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 SPACA5Q96QH8 159 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 GLTPQ9NZD2 209 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 A0A1W2PPH5 198 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 CT45A6P0DMU7 189 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 CT45A5P0DMU8 189 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 CT45A7P0DMV0 189 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 CT45A8P0DMV1 189 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 CT45A9P0DMV2 189 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 CBR1P16152 277 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 MMP11P24347 488 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 F2RP25116 425 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 PCSK6P29122 969 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 GFERP55789 205 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 RPS27AP62979 156 aaKnown RBP10.88□□□□□ -0.67
SHPRH-201ENST00000275233 UBA52P62987 128 aaKnown RBP10.88□□□□□ -0.67
SHPRH-201ENST00000275233 SMAD4Q13485 552 aaKnown RBP10.88□□□□□ -0.67
SHPRH-201ENST00000275233 CT45A2Q5DJT8 189 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 CT45A1Q5HYN5 189 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 YOD1Q5VVQ6 348 aaPredicted RBP10.88□□□□□ -0.67
SHPRH-201ENST00000275233 STEAP1BQ6NZ63 245 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 KCNIP4Q6PIL6 250 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 OR10X1Q8NGY0 326 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 CT45A3Q8NHU0 189 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 LYRM4Q9HD34 91 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 ACOXLQ9NUZ1 547 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 PURGQ9UJV8 347 aaKnown RBP10.88□□□□□ -0.67
SHPRH-201ENST00000275233 SULT1C2O00338 296 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 CCSO14618 274 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 GPRIN2O60269 458 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 KIR2DL3P43628 341 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 CCL7P80098 99 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 IL10RAQ13651 578 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 SIAH3Q8IW03 269 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 CMIPQ8IY22 773 aa10.88□□□□□ -0.67
SHPRH-201ENST00000275233 OR5M9Q8NGP3 310 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms