RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 LILRB2Q8N423 598 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 OR1S1Q8NH92 325 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 APH1AQ96BI3 265 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 FAM3DQ96BQ1 224 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 WDR34Q96EX3 536 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 LIN7BQ9HAP6 207 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 NGBQ9NPG2 151 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 R4GN57 208 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 ZNF705EA8MWA4 302 aaPredicted RBP14.06□□□□□ -0.16
TIMP3-201ENST00000266085 EPHA1P21709 976 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 NOVA1P51513 510 aaKnown RBP14.06□□□□□ -0.16
TIMP3-201ENST00000266085 WNT3P56703 355 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 TSC22D1Q15714 1073 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 ABI3BPQ7Z7G0 1075 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 SLC25A19Q9HC21 320 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 DYNLRB1Q9NP97 96 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 OR14J1Q9UGF5 321 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 CACNA1IQ9P0X4 2223 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 ZC3H12DA2A288 527 aaKnown RBP14.06□□□□□ -0.16
TIMP3-201ENST00000266085 FRG2CA6NGY1 282 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 MCRIP1C9JLW8 97 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 TBX19O60806 448 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 PRAMEF4O60810 478 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 RFPL3O75679 317 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 SPDEFO95238 335 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 FOLR1P15328 257 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 CAMLGP49069 296 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 KIRREL2Q6UWL6 708 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 MSRB3Q8IXL7 192 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 PLPP7Q8NBV4 271 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 ZNF486Q96H40 463 aaPredicted RBP14.06□□□□□ -0.16
TIMP3-201ENST00000266085 PPA2Q9H2U2 334 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 ACOXLQ9NUZ1 547 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 EPHA8P29322 1005 aaPredicted RBP14.06□□□□□ -0.16
TIMP3-201ENST00000266085 PTGS2P35354 604 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 MAP2K6P52564 334 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 GP2P55259 537 aaKnown RBP14.06□□□□□ -0.16
TIMP3-201ENST00000266085 CLDN6P56747 220 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 ACTBL2Q562R1 376 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 IDO2Q6ZQW0 420 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 NUDT9Q9BW91 350 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 SMOC1Q9H4F8 434 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 C12orf49Q9H741 205 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 ZNF346Q9UL40 294 aaKnown RBP14.06□□□□□ -0.16
TIMP3-201ENST00000266085 UGT2A1Q9Y4X1 527 aa14.06□□□□□ -0.16
TIMP3-201ENST00000266085 TMEM82A0PJX8 343 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 CBX7O95931 251 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 ATP1B1P05026 303 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 ELP2Q6IA86 826 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 FAM199XQ6PEV8 388 aaPredicted RBP14.05□□□□□ -0.16
TIMP3-201ENST00000266085 PAQR6Q6TCH4 344 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 OR6V1Q8N148 313 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 TEX19Q8NA77 164 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 DCLRE1CQ96SD1 692 aaKnown RBP14.05□□□□□ -0.16
TIMP3-201ENST00000266085 WWTR1Q9GZV5 400 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 FAM60AQ9NP50 221 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 B3GALT5Q9Y2C3 310 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 IFNA1P01562 189 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 CD1EP15812 388 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 EMDP50402 254 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 RBM39Q14498 530 aaKnown RBP14.05□□□□□ -0.16
TIMP3-201ENST00000266085 RHEBQ15382 184 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 KIF18BQ86Y91 864 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 OR1L3Q8NH93 324 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 S100A2P29034 98 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 GPR157Q5UAW9 335 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 AGAP7PQ5VUJ5 663 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 LIPHQ8WWY8 451 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 TTC9Q92623 222 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 DEFB127Q9H1M4 99 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 STEAP1Q9UHE8 339 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 ZNF638Q14966 1978 aaKnown RBP14.05□□□□□ -0.16
TIMP3-201ENST00000266085 H7C2Y5 167 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 SGCEO43556 437 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 STK17BO94768 372 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 BCKDHBP21953 392 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 NKG7Q16617 165 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 HAGHLQ6PII5 290 aaPredicted RBP14.05□□□□□ -0.16
TIMP3-201ENST00000266085 Q6ZTK2 550 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 RNF128Q8TEB7 428 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 TSSK2Q96PF2 358 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 RGCCQ9H4X1 137 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 CCDC86Q9H6F5 360 aaKnown RBP14.05□□□□□ -0.16
TIMP3-201ENST00000266085 NTN4Q9HB63 628 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 ASH2LQ9UBL3 628 aa14.05□□□□□ -0.16
TIMP3-201ENST00000266085 COLQQ9Y215 455 aaPredicted RBP14.05□□□□□ -0.16
TIMP3-201ENST00000266085 RAP2BP61225 183 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 SPEM2Q0P670 501 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 IKZF1Q13422 519 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 SOWAHCQ53LP3 525 aaPredicted RBP14.04□□□□□ -0.16
TIMP3-201ENST00000266085 SLCO5A1Q9H2Y9 848 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 KLF13Q9Y2Y9 288 aaPredicted RBP14.04□□□□□ -0.16
TIMP3-201ENST00000266085 CCDC187A0A096LP49 1063 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 CD300LBA8K4G0 201 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 HOXB5P09067 269 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 MSR1P21757 451 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 RFC3P40938 356 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 TIAL1Q01085 375 aaKnown RBP eCLIP14.04□□□□□ -0.16
TIMP3-201ENST00000266085 OR4C3Q8NH37 302 aa14.04□□□□□ -0.16
TIMP3-201ENST00000266085 GIMAP1Q8WWP7 306 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms