RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 CUBNO60494 3623 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.49□□□□□ -0.731e-10■■■■□ 22.1
TRAF4-202ENST00000262396 A0A0A6YYJ9 748 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 C5orf49A4QMS7 147 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 CENPBD1B2RD01 187 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 FAM157AC9JC47 383 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 SPRY3O43610 288 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 OR5F1O95221 314 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 MPZL1O95297 269 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 PNPP00491 289 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 ASAH2BP0C7U1 165 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 TNFRSF1BP20333 461 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 STOMP27105 288 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 ARHGDIAP52565 204 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 ERVS71-1P61550 626 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 SLC3A1Q07837 685 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 TAF11Q15544 211 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 NRN1LQ496H8 165 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 ALG10Q5BKT4 473 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 PABPC1L2AQ5JQF8 200 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 SPATA46Q5T0L3 261 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 METTL21CQ5VZV1 264 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 NANOGP8Q6NSW7 305 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 ZNF771Q7L3S4 317 aaPredicted RBP10.48□□□□□ -0.73
TRAF4-202ENST00000262396 RETREG3Q86VR2 466 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 ZNF584Q8IVC4 421 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 PCYOX1LQ8NBM8 494 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 OR4D11Q8NGI4 311 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 TMEM255BQ8WV15 326 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 ASB10Q8WXI3 467 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 LZICQ8WZA0 190 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 CCL17Q92583 94 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 ZNF75AQ96N20 296 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 JMJD8Q96S16 334 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 GAL3ST1Q99999 423 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 POLR2J2Q9GZM3 115 aaKnown RBP10.48□□□□□ -0.73
TRAF4-202ENST00000262396 NDEL1Q9GZM8 345 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 POLR2J3Q9H1A7 115 aaKnown RBP10.48□□□□□ -0.73
TRAF4-202ENST00000262396 ZNF665Q9H7R5 613 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 SIAEQ9HAT2 523 aa10.48□□□□□ -0.73
TRAF4-202ENST00000262396 YLPM1P49750 1951 aaKnown RBP10.47□□□□□ -0.73
TRAF4-202ENST00000262396 A0A0G2JMP0 313 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 A0A0X1KG70 313 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 A0A1W2PPL8 197 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 TRIM77I1YAP6 450 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 MRASO14807 208 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 EDF1O60869 148 aaKnown RBP10.47□□□□□ -0.73
TRAF4-202ENST00000262396 NCR1O76036 304 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 SLC2A10O95528 541 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 SNAP29O95721 258 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 THY1P04216 161 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 IGFBP1P08833 259 aaPredicted RBP10.47□□□□□ -0.73
TRAF4-202ENST00000262396 IFI30P13284 250 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 ZNF250P15622 560 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 CDAP32320 146 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 OR1E2P47887 323 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 UGT2B15P54855 530 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 PCBD1P61457 104 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 ERVK-25P63136 954 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 ST3GAL3Q11203 375 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 SF3A3Q12874 501 aaKnown RBP eCLIP10.47□□□□□ -0.732e-6■■■□□ 14.7
TRAF4-202ENST00000262396 PIN1Q13526 163 aaPredicted RBP10.47□□□□□ -0.73
TRAF4-202ENST00000262396 ZMAT1Q5H9K5 638 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 RABL3Q5HYI8 236 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 NHLRC1Q6VVB1 395 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 CCDC80Q76M96 950 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 RRM2BQ7LG56 351 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 NKAIN4Q8IVV8 208 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 PAQR4Q8N4S7 273 aaPredicted RBP10.47□□□□□ -0.73
TRAF4-202ENST00000262396 OR4M2Q8NGB6 313 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 OR8J3Q8NGG0 315 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 FNDC8Q8TC99 324 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 ST7LQ8TDW4 575 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 STON2Q8WXE9 905 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 GCDHQ92947 438 aaPredicted RBP10.47□□□□□ -0.73
TRAF4-202ENST00000262396 LRRC58Q96CX6 371 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 TSPAN32Q96QS1 320 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 TMEM120AQ9BXJ8 343 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 PCDHAC1Q9H158 963 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 MEPEQ9NQ76 525 aaPredicted RBP10.47□□□□□ -0.73
TRAF4-202ENST00000262396 CYSLTR2Q9NS75 346 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 UBAP1Q9NZ09 502 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 PCDHB10Q9UN67 800 aa10.47□□□□□ -0.73
TRAF4-202ENST00000262396 BBIP1A8MTZ0 92 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 GSTA4O15217 222 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 TIMM8AO60220 97 aaPredicted RBP10.46□□□□□ -0.73
TRAF4-202ENST00000262396 LYPD3O95274 346 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 THRBP10828 461 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 ZNF32P17041 273 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 TNFSF4P23510 183 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 RPL4P36578 427 aaKnown RBP10.46□□□□□ -0.73
TRAF4-202ENST00000262396 CRYBB2P43320 205 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 ARFIP2P53365 341 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 MRPS34P82930 218 aaKnown RBP10.46□□□□□ -0.73
TRAF4-202ENST00000262396 RUNX1T1Q06455 604 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 LAPTM4AQ15012 233 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 FAM209AQ5JX71 171 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 THEM4Q5T1C6 240 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 DCAF12L2Q5VW00 463 aa10.46□□□□□ -0.73
TRAF4-202ENST00000262396 BPIFB2Q8N4F0 458 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms