RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 TP53TG5Q9Y2B4 290 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 CEP250Q9BV73 2442 aa11.92□□□□□ -0.5
TMEM260-201ENST00000261556 MASP2O00187 686 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 ADRA2AP08913 450 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 NPSP0C0P6 89 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 OR12D1P0DN82 309 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 CDK2P24941 298 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 DECR1Q16698 335 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 ATPAF1Q5TC12 328 aaPredicted RBP11.91□□□□□ -0.5
TMEM260-201ENST00000261556 IL34Q6ZMJ4 242 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 HSD17B11Q8NBQ5 300 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 KLHDC9Q8NEP7 349 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 NKX3-1Q99801 234 aaPredicted RBP11.91□□□□□ -0.5
TMEM260-201ENST00000261556 APMAPQ9HDC9 416 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 CENPMQ9NSP4 180 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 KLRF1Q9NZS2 232 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 OARD1Q9Y530 152 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 BORCS7-ASMTA0A0B4J1R7 106 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 ANTXRLA6NF34 631 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 MMP11P24347 488 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 CDC34P49427 236 aaPredicted RBP11.91□□□□□ -0.5
TMEM260-201ENST00000261556 LPAL2Q16609 132 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 HNRNPA1L2Q32P51 320 aaKnown RBP11.91□□□□□ -0.5
TMEM260-201ENST00000261556 NKAIN2Q5VXU1 208 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 STEAP1BQ6NZ63 245 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 HTR3DQ70Z44 454 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 ARHGAP12Q8IWW6 846 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 NRMQ8IXM6 262 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 TMEM104Q8NE00 496 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 OR56A1Q8NGH5 318 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 OR52N2Q8NGI0 321 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 PDCD1LG2Q9BQ51 273 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 KLF16Q9BXK1 252 aaPredicted RBP11.91□□□□□ -0.5
TMEM260-201ENST00000261556 PATZ1Q9HBE1 687 aaKnown RBP11.91□□□□□ -0.5
TMEM260-201ENST00000261556 DNAJC4Q9NNZ3 241 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 SERINC1Q9NRX5 453 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 LRFN1Q9P244 771 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 V9GY05 133 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 PKD1L3Q7Z443 1732 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 EREGO14944 169 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 OR4E1P0C645 316 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 CD82P27701 267 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 PTGER1P34995 402 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 TMEM173Q86WV6 379 aaPredicted RBP11.91□□□□□ -0.5
TMEM260-201ENST00000261556 LRRC18Q8N456 261 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 NECAP1Q8NC96 275 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 HSD17B8Q92506 261 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 ZMYND19Q96E35 227 aaPredicted RBP11.91□□□□□ -0.5
TMEM260-201ENST00000261556 MARS2Q96GW9 593 aaKnown RBP11.91□□□□□ -0.5
TMEM260-201ENST00000261556 PDE7BQ9NP56 450 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 ICKQ9UPZ9 632 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 SLC35A3Q9Y2D2 325 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 V9GYS6 101 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 SCN9AQ15858 1988 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 ZNF727A8MUV8 499 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 ZNF736B4DX44 427 aaPredicted RBP11.91□□□□□ -0.5
TMEM260-201ENST00000261556 SLC2A10O95528 541 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 SLC36A2Q495M3 483 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 UNQ6494/PRO21346Q6UXR6 183 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 C17orf78Q8N4C9 275 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 EIF4E3Q8N5X7 224 aaKnown RBP11.91□□□□□ -0.5
TMEM260-201ENST00000261556 RLN3Q8WXF3 142 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 RAB24Q969Q5 203 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 TCTN2Q96GX1 697 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 OR5B12Q96R08 314 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 SLC22A12Q96S37 553 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 SLC2A9Q9NRM0 540 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 FOXJ2Q9P0K8 574 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 C5AR2Q9P296 337 aa11.91□□□□□ -0.5
TMEM260-201ENST00000261556 CNOT1A5YKK6 2376 aaKnown RBP11.91□□□□□ -0.5
TMEM260-201ENST00000261556 COLCA2A8K830 154 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 NPIPB9F8W1W9 429 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 SMPD2O60906 423 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 NDUFB6O95139 128 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 CD3DP04234 171 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 TRHRP34981 398 aaPredicted RBP11.9□□□□□ -0.5
TMEM260-201ENST00000261556 ACTBP60709 375 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 ACTG1P63261 375 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 SQSTM1Q13501 440 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 MEF2DQ14814 521 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 KHDC3LQ587J8 217 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 SIGLEC11Q96RL6 698 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 DMRTA2Q96SC8 542 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 C2orf88Q9BSF0 95 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 G6PC3Q9BUM1 346 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 CCDC86Q9H6F5 360 aaKnown RBP11.9□□□□□ -0.5
TMEM260-201ENST00000261556 MVB12BQ9H7P6 319 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 PARD6AQ9NPB6 346 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 UBR2Q8IWV8 1755 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 SPTBP11277 2137 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 TEX13DA0A0J9YY54 714 aaPredicted RBP11.9□□□□□ -0.5
TMEM260-201ENST00000261556 FEZF1A0PJY2 475 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 GAPDHSO14556 408 aaPredicted RBP11.9□□□□□ -0.5
TMEM260-201ENST00000261556 TRGC2P03986 189 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 MPC1LP0DKB6 136 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 MSR1P21757 451 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 TSFMP43897 325 aaKnown RBP11.9□□□□□ -0.5
TMEM260-201ENST00000261556 XCR1P46094 333 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 RGRP47804 291 aa11.9□□□□□ -0.5
TMEM260-201ENST00000261556 TRA2AQ13595 282 aaKnown RBP eCLIP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms