RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 FXYD6P3P58550 94 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 LCN6P62502 163 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 SLC36A2Q495M3 483 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 TMEM53Q6P2H8 277 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 THSD4Q6ZMP0 1018 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 FAM122BQ7Z309 247 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 DPPA2Q7Z7J5 298 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 SVOPLQ8N434 492 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 PAQR4Q8N4S7 273 aaPredicted RBP19.81■□□□□ 0.76
LSM4-201ENST00000252816 ZNF525Q8N782 197 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 OR10H5Q8NGA6 315 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 RSRC1Q96IZ7 334 aaKnown RBP19.81■□□□□ 0.76
LSM4-201ENST00000252816 RBP7Q96R05 134 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 DOK1Q99704 481 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 RNF121Q9H920 327 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 ACTR3BQ9P1U1 418 aa19.81■□□□□ 0.76
LSM4-201ENST00000252816 GADD45GO95257 159 aa19.8■□□□□ 0.76
LSM4-201ENST00000252816 FABP3P05413 133 aa19.8■□□□□ 0.76
LSM4-201ENST00000252816 NR2C1P13056 603 aa19.8■□□□□ 0.76
LSM4-201ENST00000252816 SGCAQ16586 387 aa19.8■□□□□ 0.76
LSM4-201ENST00000252816 MESTQ5EB52 335 aa19.8■□□□□ 0.76
LSM4-201ENST00000252816 ZER1Q7Z7L7 766 aa19.8■□□□□ 0.76
LSM4-201ENST00000252816 SLC30A7Q8NEW0 376 aa19.8■□□□□ 0.76
LSM4-201ENST00000252816 GRHPRQ9UBQ7 328 aa19.8■□□□□ 0.76
LSM4-201ENST00000252816 IL20RAQ9UHF4 553 aa19.8■□□□□ 0.76
LSM4-201ENST00000252816 AURKCQ9UQB9 309 aa19.8■□□□□ 0.76
LSM4-201ENST00000252816 NDUFB2O95178 105 aa19.79■□□□□ 0.76
LSM4-201ENST00000252816 F12P00748 615 aaPredicted RBP19.79■□□□□ 0.76
LSM4-201ENST00000252816 CCL2P13500 99 aa19.79■□□□□ 0.76
LSM4-201ENST00000252816 SMIM11AP58511 58 aa19.79■□□□□ 0.76
LSM4-201ENST00000252816 ZDHHC21Q8IVQ6 265 aa19.79■□□□□ 0.76
LSM4-201ENST00000252816 ARHGAP24Q8N264 748 aa19.79■□□□□ 0.76
LSM4-201ENST00000252816 FNDC8Q8TC99 324 aa19.79■□□□□ 0.76
LSM4-201ENST00000252816 GPX7Q96SL4 187 aaPredicted RBP19.79■□□□□ 0.76
LSM4-201ENST00000252816 VRK1Q99986 396 aaPredicted RBP19.79■□□□□ 0.76
LSM4-201ENST00000252816 RHNO1Q9BSD3 238 aa19.79■□□□□ 0.76
LSM4-201ENST00000252816 CMAHPQ9Y471 501 aa19.79■□□□□ 0.76
LSM4-201ENST00000252816 SPEF1Q9Y4P9 236 aa19.79■□□□□ 0.76
LSM4-201ENST00000252816 FN1P02751 2386 aaKnown RBP19.79■□□□□ 0.76
LSM4-201ENST00000252816 RTTNQ86VV8 2226 aa19.79■□□□□ 0.76
LSM4-201ENST00000252816 UNC119BA6NIH7 251 aa19.78■□□□□ 0.76
LSM4-201ENST00000252816 VSTM5A8MXK1 200 aa19.78■□□□□ 0.76
LSM4-201ENST00000252816 MGRN1O60291 552 aa19.78■□□□□ 0.76
LSM4-201ENST00000252816 IGFBP1P08833 259 aaPredicted RBP19.78■□□□□ 0.76
LSM4-201ENST00000252816 RRM2P31350 389 aa19.78■□□□□ 0.76
LSM4-201ENST00000252816 GLRXP35754 106 aa19.78■□□□□ 0.76
LSM4-201ENST00000252816 MS4A2Q01362 244 aa19.78■□□□□ 0.76
LSM4-201ENST00000252816 GALK2Q01415 458 aa19.78■□□□□ 0.76
LSM4-201ENST00000252816 KRTAP1-1Q07627 177 aa19.78■□□□□ 0.76
LSM4-201ENST00000252816 CLEC2AQ6UVW9 174 aa19.78■□□□□ 0.76
LSM4-201ENST00000252816 FOXL2NBQ6ZUU3 175 aa19.78■□□□□ 0.76
LSM4-201ENST00000252816 ZCCHC24Q8N2G6 241 aaKnown RBP19.78■□□□□ 0.76
LSM4-201ENST00000252816 CPEB3Q8NE35 698 aaKnown RBP19.78■□□□□ 0.76
LSM4-201ENST00000252816 MRPL24Q96A35 216 aaKnown RBP19.78■□□□□ 0.76
LSM4-201ENST00000252816 RASD2Q96D21 266 aa19.78■□□□□ 0.76
LSM4-201ENST00000252816 ZNF570Q96NI8 536 aa19.78■□□□□ 0.76
LSM4-201ENST00000252816 NRIP3Q9NQ35 241 aa19.78■□□□□ 0.76
LSM4-201ENST00000252816 TAS2R1Q9NYW7 299 aa19.78■□□□□ 0.76
LSM4-201ENST00000252816 CR1P17927 2039 aa19.77■□□□□ 0.76
LSM4-201ENST00000252816 A0A096LNT2 108 aa19.77■□□□□ 0.76
LSM4-201ENST00000252816 TEX13CA0A0J9YWL9 993 aa19.77■□□□□ 0.76
LSM4-201ENST00000252816 TCRBV5S2A0A599 114 aa19.77■□□□□ 0.76
LSM4-201ENST00000252816 SLC22A23A1A5C7 686 aa19.77■□□□□ 0.76
LSM4-201ENST00000252816 ZNF32P17041 273 aa19.77■□□□□ 0.76
LSM4-201ENST00000252816 HOXB4P17483 251 aaPredicted RBP19.77■□□□□ 0.76
LSM4-201ENST00000252816 LAP3P28838 519 aa19.77■□□□□ 0.76
LSM4-201ENST00000252816 PPOXP50336 477 aa19.77■□□□□ 0.76
LSM4-201ENST00000252816 DSCR9P59020 149 aa19.77■□□□□ 0.76
LSM4-201ENST00000252816 PABPC1L2AQ5JQF8 200 aa19.77■□□□□ 0.76
LSM4-201ENST00000252816 FAM27BQ5VT28 67 aa19.77■□□□□ 0.76
LSM4-201ENST00000252816 MRPL37Q9BZE1 423 aaKnown RBP19.77■□□□□ 0.76
LSM4-201ENST00000252816 NDEL1Q9GZM8 345 aa19.77■□□□□ 0.76
LSM4-201ENST00000252816 KRCC1Q9NPI7 259 aaPredicted RBP19.77■□□□□ 0.76
LSM4-201ENST00000252816 SLC7A8Q9UHI5 535 aa19.77■□□□□ 0.76
LSM4-201ENST00000252816 PRSS37A4D1T9 235 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 XKRYO14609 159 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 IMPA2O14732 288 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 SCG5P05408 212 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 APEX1P27695 318 aaKnown RBP19.76■□□□□ 0.75
LSM4-201ENST00000252816 SDHAP31040 664 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 HSF2Q03933 536 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 KRR1Q13601 381 aaKnown RBP19.76■□□□□ 0.75
LSM4-201ENST00000252816 TRIM25Q14258 630 aaKnown RBP19.76■□□□□ 0.75
LSM4-201ENST00000252816 MTX3Q5HYI7 312 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 LCN8Q6JVE9 175 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 LRP11Q86VZ4 500 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 DHFR2Q86XF0 187 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 BCAS4Q8TDM0 211 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 C10orf105Q8TEF2 133 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 CLPTM1LQ96KA5 538 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 KCNN2Q9H2S1 579 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 MUC13Q9H3R2 512 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 CCNB1IP1Q9NPC3 277 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 FZR1Q9UM11 496 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 PRPF19Q9UMS4 504 aaKnown RBP19.76■□□□□ 0.75
LSM4-201ENST00000252816 IER3IP1Q9Y5U9 82 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 NAV3Q8IVL0 2385 aa19.76■□□□□ 0.75
LSM4-201ENST00000252816 IQCMA0A1B0GVH7 501 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 A0A1W2PPL8 197 aa19.75■□□□□ 0.75
LSM4-201ENST00000252816 OR10H3O60404 316 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms