RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 MAB21L2Q9Y586 359 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 FER1L5A0AVI2 2057 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 RPS10-NUDT3A0A1W2PQS6 291 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 HSPB2A8KAH6 182 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 H3BMH7 237 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 H7C417 338 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 M0R233 179 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 CDC40O60508 579 aaKnown RBP eCLIP12.97□□□□□ -0.33
HIF3A-202ENST00000244303 RBBP9O75884 186 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 ITGA5P08648 1049 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 FBXO45P0C2W1 286 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 CCKBRP32239 447 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 EPHA4P54764 986 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 SCAND1P57086 179 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 NXPH1P58417 271 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 ELAVL1Q15717 326 aaKnown RBP12.97□□□□□ -0.33
HIF3A-202ENST00000244303 HSPB2Q16082 182 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 ACKR1Q16570 336 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 C14orf28Q4W4Y0 310 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 TMEM65Q6PI78 240 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 MAMDC2Q7Z304 686 aaPredicted RBP12.97□□□□□ -0.33
HIF3A-202ENST00000244303 OR52B4Q8NGK2 314 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 OR1F2PQ96R84 312 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 OR8B4Q96RC9 309 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 MTFP1Q9UDX5 166 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 GTF2A1LQ9UNN4 478 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 SLC22A13Q9Y226 551 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 GGT3PA6NGU5 568 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 RHPN2P1A8MT19 583 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 PYCARD-AS1I3L0S3 204 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 TSPAN2O60636 221 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 CTAG2O75638 210 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 ATF4P18848 351 aaPredicted RBP12.97□□□□□ -0.33
HIF3A-202ENST00000244303 POU3F4P49335 361 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 MECP2P51608 486 aaKnown RBP12.97□□□□□ -0.33
HIF3A-202ENST00000244303 PSMA6P60900 246 aaKnown RBP12.97□□□□□ -0.33
HIF3A-202ENST00000244303 PLCXD2Q0VAA5 305 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 SLC17A1Q14916 467 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 VWA2Q5GFL6 755 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 HLA-DQA1Q5Y7H0 255 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 ANKRD16Q6P6B7 361 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 CHMP1BQ7LBR1 199 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 BIVMQ86UB2 503 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 PRSS58Q8IYP2 241 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 OR4C16Q8NGL9 310 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 PPP1R14AQ96A00 147 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 WDR89Q96FK6 387 aaPredicted RBP12.97□□□□□ -0.33
HIF3A-202ENST00000244303 ZDHHC12Q96GR4 267 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 NKX3-1Q99801 234 aaPredicted RBP12.97□□□□□ -0.33
HIF3A-202ENST00000244303 TBL1XR1Q9BZK7 514 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 GPN1Q9HCN4 374 aaPredicted RBP12.97□□□□□ -0.33
HIF3A-202ENST00000244303 RDH8Q9NYR8 311 aa12.97□□□□□ -0.33
HIF3A-202ENST00000244303 PRSS37A4D1T9 235 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 ALG1L2C9J202 215 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 SLC16A7O60669 478 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 PNPP00491 289 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 IL5P05113 134 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 SPARCP09486 303 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 GP1BBP13224 206 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 PGCP20142 388 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 CSNK1EP49674 416 aaKnown RBP12.96□□□□□ -0.33
HIF3A-202ENST00000244303 RPL27P61353 136 aaKnown RBP12.96□□□□□ -0.33
HIF3A-202ENST00000244303 INSM1Q01101 510 aaPredicted RBP12.96□□□□□ -0.33
HIF3A-202ENST00000244303 GUCA2AQ02747 115 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 ETFDHQ16134 617 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 SGCBQ16585 318 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 YOD1Q5VVQ6 348 aaPredicted RBP12.96□□□□□ -0.33
HIF3A-202ENST00000244303 OR4D10Q8NGI6 311 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 ZNF519Q8TB69 540 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 ARPC5LQ9BPX5 153 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 CHRNA10Q9GZZ6 450 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 MRPL22Q9NWU5 206 aaKnown RBP12.96□□□□□ -0.33
HIF3A-202ENST00000244303 KIF26BQ2KJY2 2108 aa12.96□□□□□ -0.33
HIF3A-202ENST00000244303 ASXL3Q9C0F0 2248 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 A0A1W2PQD3 144 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 TCRBV16S1A1N1A0A5B0 115 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 MEIS3P1A6NDR6 274 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 SNRPGP15A8MWD9 76 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 TSPAN4O14817 238 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 SUSD5O60279 629 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 EIF4E2O60573 245 aaKnown RBP12.96□□□□□ -0.34
HIF3A-202ENST00000244303 TPPPO94811 219 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 KDM4BO94953 1096 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 GIPP09681 153 aaPredicted RBP12.96□□□□□ -0.34
HIF3A-202ENST00000244303 RRASP10301 218 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 DCAF7P61962 342 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 MFSD13AQ14CX5 517 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 NSDHLQ15738 373 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 CSRP2Q16527 193 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 ASPHD2Q6ICH7 369 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 FDX2Q6P4F2 183 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 ZNF679Q8IYX0 411 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 UXS1Q8NBZ7 420 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 WWTR1Q9GZV5 400 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 RAB33BQ9H082 229 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 CDV3Q9UKY7 258 aaKnown RBP12.96□□□□□ -0.34
HIF3A-202ENST00000244303 UNC13CQ8NB66 2214 aa12.96□□□□□ -0.34
HIF3A-202ENST00000244303 ARID1BQ8NFD5 2236 aaPredicted RBP12.95□□□□□ -0.34
HIF3A-202ENST00000244303 TMED7-TICAM2A0A0A6YYA0 188 aa12.95□□□□□ -0.34
HIF3A-202ENST00000244303 OR6A2O95222 327 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms