RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 IGHV1-18A0A0C4DH31 117 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 A0A1W2PPL8 197 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 FARS2O95363 451 aaKnown RBP12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 TXNDC12O95881 172 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 LYNP07948 512 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 APEHP13798 732 aaKnown RBP12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 FASP25445 335 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 CDKN2AP42771 156 aaKnown RBP12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 IDH3GP51553 393 aaPredicted RBP12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 NPRL3Q12980 569 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 SLC35F1Q5T1Q4 408 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 SHQ1Q6PI26 577 aaKnown RBP12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 PTCHD4Q6ZW05 846 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 ADCK1Q86TW2 530 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 JAZF1Q86VZ6 243 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 CCDC36Q8IYA8 594 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 OR4K13Q8NH42 304 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 NANOS1Q8WY41 292 aaKnown RBP12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 LRTOMTQ8WZ04 291 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 AKAP1Q92667 903 aaKnown RBP eCLIP12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 NEUROG1Q92886 237 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 SLC38A2Q96QD8 506 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 TSSK6Q9BXA6 273 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 SEC61A2Q9H9S3 476 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 ZNF556Q9HAH1 456 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 NOX3Q9HBY0 568 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 IL20Q9NYY1 176 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 ABCA4P78363 2273 aa12.8□□□□□ -0.36
PCOLCE-201ENST00000223061 CELA3BP08861 270 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 FCGR1AP12314 374 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 CBR1P16152 277 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 HIST1H1CP16403 213 aaKnown RBP12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 ETFDHQ16134 617 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 SGCAQ16586 387 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 GSG1Q2KHT4 349 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 LEG1Q6P5S2 330 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 SLC22A25Q6T423 547 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 AMIGO2Q86SJ2 522 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 LRRC18Q8N456 261 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 ATG16L2Q8NAA4 619 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 FGFBP3Q8TAT2 258 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 FOXN4Q96NZ1 517 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 NMNAT3Q96T66 252 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 B3GNT2Q9NY97 397 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 ZNF224Q9NZL3 707 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 PLEKHA6Q9Y2H5 1048 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 H3BN98 237 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 ARPC3O15145 178 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 AHCYL1O43865 530 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 SLC16A7O60669 478 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 UBL3O95164 117 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 CECR9P0C854 216 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 CTLA4P16410 223 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 ARR3P36575 388 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 GIPRP48546 466 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 MRPS34P82930 218 aaKnown RBP12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 COX10Q12887 443 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 SLC36A3Q495N2 470 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 PAMR1Q6UXH9 720 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 CD300LDQ6UXZ3 194 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 SLC16A14Q7RTX9 510 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 MYPOPQ86VE0 399 aaPredicted RBP12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 OR52E2Q8NGJ4 325 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 LILRB1Q8NHL6 650 aaPredicted RBP12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 RADILQ96JH8 1075 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 BDH2Q9BUT1 245 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 SEMA6AQ9H2E6 1030 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 SIAEQ9HAT2 523 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 MOV10Q9HCE1 1003 aaKnown RBP12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 VSX1Q9NZR4 365 aaPredicted RBP12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 KIF17Q9P2E2 1029 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 CRNNQ9UBG3 495 aaPredicted RBP12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 ST6GALNAC2Q9UJ37 374 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 POU2F3Q9UKI9 436 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 TEX15Q9BXT5 2789 aa12.79□□□□□ -0.36
PCOLCE-201ENST00000223061 SHISA9B4DS77 424 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 BHLHE40O14503 412 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 IDH3BO43837 385 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 RAB36O95755 333 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 IGKV3-15P01624 115 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 TP53P04637 393 aaPredicted RBP12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 ANXA8P13928 327 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 NPR2P20594 1047 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 PAX7P23759 505 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 POU1F1P28069 291 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 GUCA1AP43080 201 aaPredicted RBP12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 CDH11P55287 796 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 RAB1AP62820 205 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 DBPQ10586 325 aaPredicted RBP12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 NRN1LQ496H8 165 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 DEPDC4Q8N2C3 294 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 SDR9C7Q8NEX9 313 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 OR4Q3Q8NH05 313 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 OR5K1Q8NHB7 308 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 TEX47Q8TBZ9 253 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 NABP1Q96AH0 204 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 NRBF2Q96F24 287 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 MS4A3Q96HJ5 214 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 TSSK2Q96PF2 358 aa12.78□□□□□ -0.36
PCOLCE-201ENST00000223061 KCNS3Q9BQ31 491 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms