RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TCEA1P23193 301 aaKnown RBP12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 CD82P27701 267 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 SFTPDP35247 375 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 RPS27P42677 84 aaKnown RBP12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 B3GALT5-AS1P59052 145 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 GPR85P60893 370 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 POU4F3Q15319 338 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 Q499Y3 187 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 TMEM225Q6GV28 225 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 CNIH2Q6PI25 160 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 DEGS2Q6QHC5 323 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 LRRC28Q86X40 367 aaPredicted RBP12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 GLB1L2Q8IW92 636 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 BEST3Q8N1M1 668 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 POC5Q8NA72 575 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 NOXO1Q8NFA2 376 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 OR52N5Q8NH56 324 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 ABHD6Q9BV23 337 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 ELOVL3Q9HB03 270 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 ABRACLQ9P1F3 81 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 TEKT2Q9UIF3 430 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 ZNF318Q5VUA4 2279 aa12.78□□□□□ -0.36
RTFDC1-201ENST00000023939 FUOMA2VDF0 154 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 LRRC3CA6NJW4 275 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 ZNF814B7Z6K7 855 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 CDK2AP1O14519 115 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 RAF1P04049 648 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 IL7P13232 177 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 ZNF823P16415 610 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 SRMP19623 302 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 OR10A3P58181 314 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 CSNK2A1P68400 391 aaPredicted RBP12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 FMODQ06828 376 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 EIF2B1Q14232 305 aaKnown RBP12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 HIST3H3Q16695 136 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 RAET1LQ5VY80 246 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 ASB18Q6ZVZ8 466 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 KCNE4Q8WWG9 221 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 ABTB1Q969K4 478 aaPredicted RBP12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 THOC3Q96J01 351 aaKnown RBP12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 COMMD4Q9H0A8 199 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 NOX4Q9NPH5 578 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 CYSLTR2Q9NS75 346 aa12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 ING1Q9UK53 422 aaPredicted RBP12.77□□□□□ -0.36
RTFDC1-201ENST00000023939 TRBV5-7A0A0A0MS05 114 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 IGKV1D-43A0A0B4J1Z2 117 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 G3V3Y1 287 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 GPR171O14626 319 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 TMCC2O75069 709 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 OPN1LWP04000 364 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 EPXP11678 715 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 ZNF43P17038 809 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 NPR2P20594 1047 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 CNR1P21554 472 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 DNASE1L1P49184 302 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 BCAP31P51572 246 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 PSMD7P51665 324 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 AGFG1P52594 562 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 BAK1Q16611 211 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 DCAF10Q5QP82 559 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 STPG1Q5TH74 334 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 ZNF544Q6NX49 715 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 LRRC69Q6ZNQ3 347 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 OR8H2Q8N162 312 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 PRSS35Q8N3Z0 413 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 ST7LQ8TDW4 575 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 JSRP1Q96MG2 331 aaPredicted RBP12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 CMTM3Q96MX0 182 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 NAA11Q9BSU3 229 aaPredicted RBP12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 POLE4Q9NR33 117 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 C14orf119Q9NWQ9 140 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 STMN3Q9NZ72 180 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 MYO15AQ9UKN7 3530 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 A0A0G2JMM0 328 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 A0A1W2PPB8 328 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 A0A1W2PRS3 328 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 KIR3DP1A8MWS1 328 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 MPZL1O95297 269 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 HLA-DQB1P01920 261 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 NR2C1P13056 603 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 LAP3P28838 519 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 KIR3DL2P43630 455 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 RIDAP52758 137 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 AIMP2Q13155 320 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 KCNMB1Q16558 191 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 SLC25A35Q3KQZ1 300 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 WDR38Q5JTN6 314 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 AGAP7PQ5VUJ5 663 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 SLC25A47Q6Q0C1 308 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 LRRN1Q6UXK5 716 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 KRT77Q7Z794 578 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 GPR148Q8TDV2 347 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 NKD1Q969G9 470 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 FOXN4Q96NZ1 517 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 EMC6Q9BV81 110 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 OR2B2Q9GZK3 357 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 TBC1D24Q9ULP9 559 aa12.76□□□□□ -0.37
RTFDC1-201ENST00000023939 EML6Q6ZMW3 1958 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 ALPK2Q86TB3 2170 aa12.75□□□□□ -0.37
RTFDC1-201ENST00000023939 ACOD1A6NK06 481 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms