RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Vmn1r125L7N227 307 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Vmn1r116L7N2A6 307 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Prkar1bP12849 381 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Slc6a12P31651 614 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Nkx6-3Q3UHX8 262 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Cdk10Q3UMM4 360 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Pan3Q640Q5 837 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Abhd14bQ8VCR7 210 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 TardbpQ921F2 414 aaKnown RBP10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Vmn1r100Q9EPS5 307 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Gm5475D3YV11 175 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Fbxw28E9Q8A4 466 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 RbpjP31266 526 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 FaslgP41047 279 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Cdx2P43241 311 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Fosl1P48755 273 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Cpeb1P70166 561 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Sez6l2Q4V9Z5 910 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 ToxQ66JW3 526 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr1443Q8VFW8 312 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Tor3aQ9ER38 385 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 HcstQ9QUJ0 79 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Tbl1xQ9QXE7 527 aa10.89□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Gm13723A0A1L1SUP2 315 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 4930522L14RikE9QAG4 666 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Vmn1r175K7N6T9 304 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Socs1O35716 212 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 C1qbP14106 253 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 LepP41160 167 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Cuzd1P70412 606 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Thbs2Q03350 1172 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Prss57Q14B24 284 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Ube2fbQ3UWQ3 185 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 PcgF3Q8BTQ0 241 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Nkd2Q8VE28 461 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Tex13bQ99MW5 186 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Lrrc18Q9CQ07 262 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Stfa2P35174 103 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 MatkP41242 505 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Rpl27P61358 136 aaKnown RBP10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Ufd1P70362 307 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Rnf149Q3U2C5 394 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr331Q5NC44 324 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Mrps26Q80ZS3 200 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Gbgt1Q8VI38 347 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Rtl8bQ9D1F0 113 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Keg1Q9DCY0 295 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Polg2Q9QZM2 459 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Nprl2Q9WUE4 380 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Gm16432A0A0A6YXX9 775 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Gm20489A2AGH5 449 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Susd5G3UW60 619 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 StarP51557 284 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Prg2Q61878 223 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Gramd2bQ6PEM6 445 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Elfn1Q8C8T7 828 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Slc25a45Q8CFJ7 288 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Mmp21Q8K3F2 568 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Irf2bplQ8K3X4 775 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Trib3Q8K4K2 354 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Mmd2Q8R189 247 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Masp2Q91WP0 685 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Glipr1Q9CWG1 255 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Isyna1Q9JHU9 557 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Rgs6Q9Z2H2 472 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Gm35315A0A1B0GRI2 571 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Tmem74bA2AU34 232 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Vmn1r13G5E8I3 300 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Ccbe1Q3MI99 408 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Opa3Q505D7 179 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Clns1aQ61189 236 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Chst9Q76EC5 413 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Adam20Q7M763 760 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Vmn1r83Q8R287 306 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Plet1Q8VEN2 237 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr648Q8VG19 316 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Steap4Q923B6 470 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Atg5Q99J83 275 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 CsQ9CZU6 464 aaKnown RBP10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 IckQ9JKV2 629 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 HgfacQ9R098 653 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Bmi1P25916 324 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Bdkrb2P32299 392 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 ActbP60710 375 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Actg1P63260 375 aaKnown RBP10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Doc2bP70169 412 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 SryQ05738 395 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Epha5Q60629 876 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Pea15Q62048 130 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Vwc2Q8C8N3 324 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr166Q8VGX2 312 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Rtn4ip1Q924D0 396 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Letmd1Q924L1 360 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Olfr642Q924X8 314 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Ceacam2Q925P2 520 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 CenpmQ9CQA0 180 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Trp53tg5Q9D976 238 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Mmp1aQ9EPL5 464 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Jmjd6Q9ERI5 403 aa10.88□□□□□ -0.67
Pcif1-201ENSMUST00000041643 Trav10nA0A075B622 114 aa10.87□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms