RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 UTP4Q969X6 686 aaKnown RBP23.21■■□□□ 1.31
VEGFA-231ENST00000640499 OR52D1Q9H346 318 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 SMURF2Q9HAU4 748 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 GRHPRQ9UBQ7 328 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 MGAT4BQ9UQ53 548 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 SAMHD1Q9Y3Z3 626 aaKnown RBP23.21■■□□□ 1.31
VEGFA-231ENST00000640499 IER3IP1Q9Y5U9 82 aa23.21■■□□□ 1.31
VEGFA-231ENST00000640499 TEX13CA0A0J9YWL9 993 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 A6NIZ1 184 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 CCNB2O95067 398 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 TXNDC12O95881 172 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 SOD3P08294 240 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 CALCRP30988 508 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 IFNGR2P38484 337 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 RAP1BP61224 184 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 RAP1AP62834 184 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 CD47Q08722 323 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 MICAQ29983 383 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 DEFB113Q30KQ7 82 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 NSMAFQ92636 917 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 NABP1Q96AH0 204 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 RADILQ96JH8 1075 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 SAMD8Q96LT4 415 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 CXXC4Q9H2H0 198 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 REEP1Q9H902 201 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 CISD1Q9NZ45 108 aaKnown RBP23.2■■□□□ 1.3
VEGFA-231ENST00000640499 MOKQ9UQ07 419 aa23.2■■□□□ 1.3
VEGFA-231ENST00000640499 SLC22A23A1A5C7 686 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 ATP6V1G2-DDX39BF2Z307 99 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 FKBP6O75344 327 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 CST1P01037 141 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 PAX7P23759 505 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 CAPZA2P47755 286 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 IDH3GP51553 393 aaPredicted RBP23.19■■□□□ 1.3
VEGFA-231ENST00000640499 NAAAQ02083 359 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 ETFDHQ16134 617 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 THEM4Q5T1C6 240 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 SLC22A25Q6T423 547 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 ZNF620Q6ZNG0 422 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 PTCHD4Q6ZW05 846 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 FANK1Q8TC84 345 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 FBXW5Q969U6 566 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 ZNF570Q96NI8 536 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 FOXC2Q99958 501 aa23.19■■□□□ 1.3
VEGFA-231ENST00000640499 MMADHCQ9H3L0 296 aaPredicted RBP23.19■■□□□ 1.3
VEGFA-231ENST00000640499 PPP1R3DO95685 299 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 CD8AP01732 235 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 TP53P04637 393 aaPredicted RBP23.18■■□□□ 1.3
VEGFA-231ENST00000640499 SCG5P05408 212 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 OR8G3PP0DMU2 310 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 CD79AP11912 226 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 ZNF14P17017 642 aaPredicted RBP23.18■■□□□ 1.3
VEGFA-231ENST00000640499 SDHAP31040 664 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 ARR3P36575 388 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 CDKN2AP42771 156 aaKnown RBP23.18■■□□□ 1.3
VEGFA-231ENST00000640499 ART1P52961 327 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 CDH11P55287 796 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 NRN1LQ496H8 165 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 FOXL2NBQ6ZUU3 175 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 LINC00471Q8N535 108 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 AQP11Q8NBQ7 271 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 MS4A3Q96HJ5 214 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 RBP7Q96R05 134 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 CCL19Q99731 98 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 EGLN3Q9H6Z9 239 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 EDARQ9UNE0 448 aa23.18■■□□□ 1.3
VEGFA-231ENST00000640499 PRSS37A4D1T9 235 aa23.17■■□□□ 1.3
VEGFA-231ENST00000640499 IGFBP1P08833 259 aaPredicted RBP23.17■■□□□ 1.3
VEGFA-231ENST00000640499 ZNF84P51523 738 aa23.17■■□□□ 1.3
VEGFA-231ENST00000640499 RAB1AP62820 205 aa23.17■■□□□ 1.3
VEGFA-231ENST00000640499 MRPS34P82930 218 aaKnown RBP23.17■■□□□ 1.3
VEGFA-231ENST00000640499 KRR1Q13601 381 aaKnown RBP23.17■■□□□ 1.3
VEGFA-231ENST00000640499 CCNIQ14094 377 aa23.17■■□□□ 1.3
VEGFA-231ENST00000640499 GSG1Q2KHT4 349 aa23.17■■□□□ 1.3
VEGFA-231ENST00000640499 GPR139Q6DWJ6 353 aa23.17■■□□□ 1.3
VEGFA-231ENST00000640499 ZNF584Q8IVC4 421 aa23.17■■□□□ 1.3
VEGFA-231ENST00000640499 SMAP2Q8WU79 429 aaPredicted RBP23.17■■□□□ 1.3
VEGFA-231ENST00000640499 PLA2G12AQ9BZM1 189 aa23.17■■□□□ 1.3
VEGFA-231ENST00000640499 MAP1AP78559 2803 aaPredicted RBP23.17■■□□□ 1.3
VEGFA-231ENST00000640499 CELSR1Q9NYQ6 3014 aa23.16■■□□□ 1.3
VEGFA-231ENST00000640499 SOCS2O14508 198 aa23.16■■□□□ 1.3
VEGFA-231ENST00000640499 MMP7P09237 267 aaPredicted RBP23.16■■□□□ 1.3
VEGFA-231ENST00000640499 APEHP13798 732 aaKnown RBP23.16■■□□□ 1.3
VEGFA-231ENST00000640499 GIPRP48546 466 aa23.16■■□□□ 1.3
VEGFA-231ENST00000640499 HGFACQ04756 655 aa23.16■■□□□ 1.3
VEGFA-231ENST00000640499 DBPQ10586 325 aaPredicted RBP23.16■■□□□ 1.3
VEGFA-231ENST00000640499 NPRL3Q12980 569 aa23.16■■□□□ 1.3
VEGFA-231ENST00000640499 KRTAP1-3Q8IUG1 177 aa23.16■■□□□ 1.3
VEGFA-231ENST00000640499 OR8D4Q8NGM9 314 aa23.16■■□□□ 1.3
VEGFA-231ENST00000640499 DGCR6LQ9BY27 220 aa23.16■■□□□ 1.3
VEGFA-231ENST00000640499 SIAEQ9HAT2 523 aa23.16■■□□□ 1.3
VEGFA-231ENST00000640499 NTN4Q9HB63 628 aa23.16■■□□□ 1.3
VEGFA-231ENST00000640499 BEX4Q9NWD9 120 aaPredicted RBP23.16■■□□□ 1.3
VEGFA-231ENST00000640499 VSX1Q9NZR4 365 aaPredicted RBP23.16■■□□□ 1.3
VEGFA-231ENST00000640499 LAMP3Q9UQV4 416 aa23.16■■□□□ 1.3
VEGFA-231ENST00000640499 ARPC3O15145 178 aa23.15■■□□□ 1.3
VEGFA-231ENST00000640499 CTLA4P16410 223 aa23.15■■□□□ 1.3
VEGFA-231ENST00000640499 PTDSS1P48651 473 aaKnown RBP23.15■■□□□ 1.3
VEGFA-231ENST00000640499 HS3ST5Q8IZT8 346 aa23.15■■□□□ 1.3
VEGFA-231ENST00000640499 OR10G2Q8NGC3 310 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms