RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 IGHEP01854 428 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 IDO2Q6ZQW0 420 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 ZNF587Q96SQ5 575 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 HBA1P69905 142 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 METTL11BQ5VVY1 283 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 PRSS45Q7RTY3 260 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 FBXO27Q8NI29 283 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 C7orf43Q8WVR3 580 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 SEMA6CQ9H3T2 930 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 POFUT1Q9H488 388 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 ZCCHC4Q9H5U6 513 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 IKZF5Q9H5V7 419 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 NIPAL2Q9H841 368 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 SERINC4A6NH21 518 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 CPT2P23786 658 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 PRSS36Q5K4E3 855 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 ACY3Q96HD9 319 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 CMTM3Q96MX0 182 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 ALG12Q9BV10 488 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 OSGIN1Q9UJX0 560 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 CYCSP99999 105 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 PMPCAQ10713 525 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 TMIGD2Q96BF3 282 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 LCORQ96JN0 433 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 MSL2Q9HCI7 577 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 ZNF391Q9UJN7 358 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 MMACHCQ9Y4U1 282 aa16.42■□□□□ 0.22
CACNA1A-227ENST00000636549 GLB1P16278 677 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 TAS2R46P59540 309 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 SPANXN5Q5MJ07 72 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 C17orf107Q6ZR85 190 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 GABRPO00591 440 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 ZNF511Q8NB15 262 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 OR2M7Q8NG81 312 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 GPR150Q8NGU9 434 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 SSSCA1O60232 199 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 ZNF205O95201 554 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 MEP1BQ16820 701 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 Q6ZRG5 221 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 CPEB3Q8NE35 698 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 OR5B3Q8NH48 314 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 SLC35E1Q96K37 410 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 SLC22A12Q96S37 553 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 C1orf123Q9NWV4 160 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 COL14A1Q05707 1796 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 HAX1O00165 279 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 RPL7P18124 248 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 LAP3P28838 519 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 CCL7P80098 99 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 SELPLGQ14242 412 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 FAM74A1Q5RGS3 127 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 PHYHD1Q5SRE7 291 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 C6orf89Q6UWU4 347 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 ACOT7LQ6ZUV0 252 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 PRKYO43930 277 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 OR2F2O95006 317 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 TEKQ02763 1124 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 DHRS13Q6UX07 377 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 RBM12BQ8IXT5 1001 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 OR2Z1Q8NG97 314 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 OR2I1PQ8NGU4 316 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 SLC29A1Q99808 456 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 OR11A1Q9GZK7 315 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 MAGIXQ9H6Y5 334 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 CHRNA9Q9UGM1 479 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 BTNL2Q9UIR0 455 aa16.41■□□□□ 0.22
CACNA1A-227ENST00000636549 TMEM65Q6PI78 240 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 OR51J1Q9H342 316 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 NUBP2Q9Y5Y2 271 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 LRP5LA4QPB2 252 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 FAM210AQ96ND0 272 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 BLACEA4D250 179 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 MKRN2OSH3BPM6 223 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 PENKP01210 267 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 SOWAHCQ53LP3 525 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 DTWD1Q8N5C7 304 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 GPR119Q8TDV5 335 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 ZNF281Q9Y2X9 895 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 PCDHGA9Q9Y5G4 932 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 CSO75390 466 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 CSF3P09919 207 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 SBK2P0C263 348 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 NPY1RP25929 384 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 ZNF595Q8IYB9 648 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 CCL4L1Q8NHW4 92 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 PHOSPHO2Q8TCD6 241 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 COX20Q5RI15 118 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 PM20D1Q6GTS8 502 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 GLIPR1L1Q6UWM5 242 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 HTR3DQ70Z44 454 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 MRPL10Q7Z7H8 261 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 TGIF2LYQ8IUE0 185 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 CCL17Q92583 94 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 RTL8AQ9BWD3 113 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 OLFM2O95897 454 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 BMP5P22003 454 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 PRKACBP22694 351 aa16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 ZNF140P52738 457 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 RPS25P62851 125 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-227ENST00000636549 TGIF2LXQ8IUE1 241 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms