RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 RBM15BQ8NDT2 890 aaKnown RBP15.44■□□□□ 0.06
PNKP-225ENST00000636214 SNX33Q8WV41 574 aa15.44■□□□□ 0.06
PNKP-225ENST00000636214 MCHR2Q969V1 340 aa15.44■□□□□ 0.06
PNKP-225ENST00000636214 MSI2Q96DH6 328 aaKnown RBP15.44■□□□□ 0.06
PNKP-225ENST00000636214 ZNF75AQ96N20 296 aa15.44■□□□□ 0.06
PNKP-225ENST00000636214 ZNF347Q96SE7 839 aa15.44■□□□□ 0.06
PNKP-225ENST00000636214 GSTA4O15217 222 aa15.43■□□□□ 0.06
PNKP-225ENST00000636214 MGRN1O60291 552 aa15.43■□□□□ 0.06
PNKP-225ENST00000636214 IGFBP5P24593 272 aa15.43■□□□□ 0.06
PNKP-225ENST00000636214 APEX1P27695 318 aaKnown RBP15.43■□□□□ 0.06
PNKP-225ENST00000636214 AQP2P41181 271 aa15.43■□□□□ 0.06
PNKP-225ENST00000636214 GUCA1AP43080 201 aaPredicted RBP15.43■□□□□ 0.06
PNKP-225ENST00000636214 ALDH3B1P43353 468 aa15.43■□□□□ 0.06
PNKP-225ENST00000636214 CD47Q08722 323 aa15.43■□□□□ 0.06
PNKP-225ENST00000636214 NRN1LQ496H8 165 aa15.43■□□□□ 0.06
PNKP-225ENST00000636214 ICA1LQ8NDH6 482 aa15.43■□□□□ 0.06
PNKP-225ENST00000636214 ASB10Q8WXI3 467 aa15.43■□□□□ 0.06
PNKP-225ENST00000636214 RCN3Q96D15 328 aa15.43■□□□□ 0.06
PNKP-225ENST00000636214 PRRC1Q96M27 445 aa15.43■□□□□ 0.06
PNKP-225ENST00000636214 CCNB1IP1Q9NPC3 277 aa15.43■□□□□ 0.06
PNKP-225ENST00000636214 C20orf141Q9NUB4 165 aa15.43■□□□□ 0.06
PNKP-225ENST00000636214 FZR1Q9UM11 496 aa15.43■□□□□ 0.06
PNKP-225ENST00000636214 FBN1P35555 2871 aaKnown RBP15.43■□□□□ 0.06
PNKP-225ENST00000636214 HTR3EA5X5Y0 456 aa15.42■□□□□ 0.06
PNKP-225ENST00000636214 TRMUO75648 421 aaKnown RBP15.42■□□□□ 0.06
PNKP-225ENST00000636214 LCKP06239 509 aa15.42■□□□□ 0.06
PNKP-225ENST00000636214 FAM157BP0CG42 384 aa15.42■□□□□ 0.06
PNKP-225ENST00000636214 ACADSP16219 412 aa15.42■□□□□ 0.06
PNKP-225ENST00000636214 TCN1P20061 433 aaPredicted RBP15.42■□□□□ 0.06
PNKP-225ENST00000636214 APLNRP35414 380 aa15.42■□□□□ 0.06
PNKP-225ENST00000636214 GUCY1A3Q02108 690 aa15.42■□□□□ 0.06
PNKP-225ENST00000636214 TOP3AQ13472 1001 aaPredicted RBP15.42■□□□□ 0.06
PNKP-225ENST00000636214 TAF11Q15544 211 aa15.42■□□□□ 0.06
PNKP-225ENST00000636214 FXNQ16595 210 aa15.42■□□□□ 0.06
PNKP-225ENST00000636214 LRRC18Q8N456 261 aa15.42■□□□□ 0.06
PNKP-225ENST00000636214 FGFBP3Q8TAT2 258 aa15.42■□□□□ 0.06
PNKP-225ENST00000636214 HPS1Q92902 700 aa15.42■□□□□ 0.06
PNKP-225ENST00000636214 SNX18Q96RF0 628 aa15.42■□□□□ 0.06
PNKP-225ENST00000636214 FNDC11Q9BVV2 318 aa15.42■□□□□ 0.06
PNKP-225ENST00000636214 REPIN1Q9BWE0 567 aaKnown RBP15.42■□□□□ 0.06
PNKP-225ENST00000636214 LRP5LA4QPB2 252 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 IFNW1P05000 195 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 SAGP10523 405 aaPredicted RBP15.41■□□□□ 0.06
PNKP-225ENST00000636214 IFI30P13284 250 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 RAD52P43351 418 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 GPR6P46095 362 aaPredicted RBP15.41■□□□□ 0.06
PNKP-225ENST00000636214 KLF3P57682 345 aaPredicted RBP15.41■□□□□ 0.06
PNKP-225ENST00000636214 SELENOWP63302 87 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 MAD2L1BPQ15013 274 aaPredicted RBP15.41■□□□□ 0.06
PNKP-225ENST00000636214 ALG10Q5BKT4 473 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 FAM120AOSQ5T036 256 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 CGB2Q6NT52 195 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 TMEM154Q6P9G4 183 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 POU5F2Q8N7G0 328 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 ARIH2OSQ8N7S6 290 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 MOSPD2Q8NHP6 518 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 RP9Q8TA86 221 aaKnown RBP15.41■□□□□ 0.06
PNKP-225ENST00000636214 C11orf40Q8WZ69 217 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 BCL2L14Q9BZR8 327 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 OR51B6Q9H340 312 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 ARMCX1Q9P291 453 aa15.41■□□□□ 0.06
PNKP-225ENST00000636214 PHF1O43189 567 aaPredicted RBP15.4■□□□□ 0.06
PNKP-225ENST00000636214 PIP5K1CO60331 668 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 CCDC22O60826 627 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 ZNF682O95780 498 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 MT-ND5P03915 603 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 TACSTD2P09758 323 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 CCL2P13500 99 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 DRD4P21917 467 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 PCMT1P22061 227 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 CCNOP22674 350 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 RUNX1T1Q06455 604 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 MOGQ16653 247 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 HIST3H3Q16695 136 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 MSMPQ1L6U9 139 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 C10orf128Q5T292 105 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 UNQ6126/PRO20091Q6UXV3 157 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 LRP11Q86VZ4 500 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 ZNF584Q8IVC4 421 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 LINC01356Q8N9X3 169 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 SYNPRQ8TBG9 265 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 FNDC8Q8TC99 324 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 LIPHQ8WWY8 451 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 GEMIN6Q8WXD5 167 aaKnown RBP15.4■□□□□ 0.06
PNKP-225ENST00000636214 NSMAFQ92636 917 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 RDH5Q92781 318 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 BPIFA2Q96DR5 249 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 RBP7Q96R05 134 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 MRPL13Q9BYD1 178 aaKnown RBP15.4■□□□□ 0.06
PNKP-225ENST00000636214 NDEL1Q9GZM8 345 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 TXNIPQ9H3M7 391 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 SIAEQ9HAT2 523 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 SMURF2Q9HAU4 748 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 SLCO1C1Q9NYB5 712 aa15.4■□□□□ 0.06
PNKP-225ENST00000636214 NPIPB13A6NJU9 1138 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 NPIPB4C9JG80 1138 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 LYNX1G3V0Z9 82 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 NDUFAB1O14561 156 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 SLC2A10O95528 541 aa15.39■□□□□ 0.05
PNKP-225ENST00000636214 LYNX1P0DP58 116 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms