RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	VN1R1	Q9GZP7	353 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	DNTTIP1	Q9H147	329 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	EMC7	Q9NPA0	242 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	WIF1	Q9Y5W5	379 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ABCA1	O95477	2261 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	DIDO1	Q9BTC0	2240 aa	Known RBP	13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	CXorf51A	A0A1B0GTR3	108 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	TEX51	A0A1B0GUA7	166 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	HIST1H1C	P16403	213 aa	Known RBP	13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	TNFSF8	P32971	234 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	RNF4	P78317	190 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ACKR1	Q16570	336 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	LTC4S	Q16873	150 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	GDPGP1	Q6ZNW5	385 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PARP16	Q8N5Y8	322 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SYNPR	Q8TBG9	265 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	CT55	Q8WUE5	264 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	WASF3	Q9UPY6	502 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	C19orf67	A6NJJ6	358 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ANKRD30BL	A7E2S9	258 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PRAMEF4	O60810	478 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SNRNP200	O75643	2136 aa	Known RBP	13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	EIF1	P41567	113 aa	Known RBP	13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	EFNA3	P52797	238 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	RAE1	P78406	368 aa	Known RBP	13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.05	□□□□□ -0.32	2e-6	■□□□□ 9
NEDD4L-238	ENST00000635997	PRAMEF9	Q5VWM5	478 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	NXNL2	Q5VZ03	156 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	DCXR	Q7Z4W1	244 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	LYSMD2	Q8IV50	215 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ZBTB44	Q8NCP5	570 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ACOT12	Q8WYK0	555 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	TEAD3	Q99594	435 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	C19orf43	Q9BQ61	176 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	KANTR	A0A1W2PQU2	76 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MLLT11	Q13015	90 aa	Predicted RBP	13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ADPRM	Q3LIE5	342 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SLX4IP	Q5VYV7	408 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	OR11G2	Q8NGC1	345 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	GNRHR2	Q96P88	292 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ZNF471	Q9BX82	626 aa	Predicted RBP	13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MGAT4C	Q9UBM8	478 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PCOLCE2	Q9UKZ9	415 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	FAM90A27P	A6NNH2	459 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	LIPA	P38571	399 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ISL1	P61371	349 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SYT14P1	Q58G82	188 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	TMEM205	Q6UW68	189 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	TMEM200A	Q86VY9	491 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MSRB3	Q8IXL7	192 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	LRRC56	Q8IYG6	542 aa	Predicted RBP	13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ZNF687	Q8N1G0	1237 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SNX18	Q96RF0	628 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	RNF167	Q9H6Y7	350 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PLSCR3	Q9NRY6	295 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	UBE2J1	Q9Y385	318 aa	Predicted RBP	13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	HRH3	Q9Y5N1	445 aa		13.05	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ATP6V1G2-DDX39B	F2Z307	99 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	DIRAS3	O95661	229 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	OR2T7	P0C7T2	308 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ETV5	P41161	510 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	AKR1C2	P52895	323 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ADARB1	P78563	741 aa	Known RBP	13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	FGFBP1	Q14512	234 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SSPN	Q14714	243 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PWWP2B	Q6NUJ5	590 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	DPY19L2P2	Q6ZN68	376 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SYT9	Q86SS6	491 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	RDH10	Q8IZV5	341 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	OR52I1	Q8NGK6	324 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	OR2T27	Q8NH04	317 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ZNF226	Q9NYT6	803 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	FBXL4	Q9UKA2	621 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	YARS2	Q9Y2Z4	477 aa	Known RBP	13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ZNF175	Q9Y473	711 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997		A0A096LPE4	126 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997		A0A1W2PPZ6	126 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997		B8ZZF3	427 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SLC16A6	O15403	523 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	RAB3D	O95716	219 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ZNF883	P0CG24	379 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	EVI2B	P34910	448 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MTCP1	P56278	107 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	DUSP8	Q13202	625 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	FAM209A	Q5JX71	171 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ASH2L	Q9UBL3	628 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ZNF281	Q9Y2X9	895 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SCN2A	Q99250	2005 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	LCN10	Q6JVE6	187 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	C3orf33	Q6P1S2	294 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	LACC1	Q8IV20	430 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	BBS1	Q8NFJ9	593 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	OR5H2	Q8NGV7	314 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	QPCTL	Q9NXS2	382 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	C21orf140	B9A014	251 aa		13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	EIF4E2	O60573	245 aa	Known RBP	13.04	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PAH	P00439	452 aa		13.04	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms