RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 MYBPHLA2RUH7 354 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 VPS37CA5D8V6 355 aaPredicted RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ARHGEF35A5YM69 484 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CCDC169A6NNP5 214 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 B4DXG7 233 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 F8VP50 259 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 K7EQS6 105 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 FAM189A1O60320 539 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 NEMFO60524 1076 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ICOSLGO75144 302 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 SEC22BO75396 215 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 MED6O75586 246 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 UGT2B17O75795 530 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 TNFSF13O75888 250 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 SLITRK3O94933 977 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 OR4F21O95013 312 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 LRATO95237 230 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 TRIM16O95361 564 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 GNA14O95837 355 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 F10P00742 488 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 INSP01308 110 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 IGKV2D-28P01615 120 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 PCCBP05166 539 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 IGHV4-34P06331 123 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 RETP07949 1114 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 PLEKP08567 350 aaPredicted RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 PSG2P11465 335 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 RNH1P13489 461 aaKnown RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ABOP16442 354 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 HMGA1P17096 107 aaKnown RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 PSMC3P17980 439 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 POLR2EP19388 210 aaKnown RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CYP2F1P24903 491 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 PSMA2P25787 234 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 DPP4P27487 766 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 PRDX3P30048 256 aaKnown RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 FGF9P31371 208 aaPredicted RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CD70P32970 193 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 NUDT1P36639 197 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CCT6AP40227 531 aaKnown RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 P2RY2P41231 377 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CXCL12P48061 93 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CSNK1EP49674 416 aaKnown RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 STARP49675 285 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ACADVLP49748 655 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CCR6P51684 374 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 EFNA3P52797 238 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 SH3BGRP55822 239 aaPredicted RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 BIDP55957 195 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 NUP107P57740 925 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 PPP1CAP62136 330 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 TFAMQ00059 246 aaKnown RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 TGFBR3Q03167 851 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF33AQ06730 810 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ADIGQ0VDE8 80 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 TRDNQ13061 729 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 C1orf61Q13536 156 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 GAMTQ14353 236 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ATXN7L3Q14CW9 347 aaPredicted RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ARL6IP1Q15041 203 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 PTGES3Q15185 160 aaKnown RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ALX1Q15699 326 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 IGFBP7Q16270 282 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CDKN3Q16667 212 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ZSWIM7Q19AV6 140 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CCDC14Q49A88 953 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 TMEM52BQ4KMG9 183 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 TFDP3Q5H9I0 405 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF311Q5JNZ3 666 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 SAMD4BQ5PRF9 694 aaKnown RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 C1orf146Q5VVC0 180 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 NEK5Q6P3R8 708 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 GUSBP11Q6P575 273 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 LRRC8BQ6P9F7 803 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CCDC137Q6PK04 289 aaKnown RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 TMEM184AQ6ZMB5 413 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 STAC2Q6ZMT1 411 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 Q6ZN92 141 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 RUFY3Q7L099 469 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CBWD2Q8IUF1 395 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ZBTB8OSQ8IWT0 167 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 SKA3Q8IX90 412 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 NELFCDQ8IXH7 590 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ELMOD2Q8IZ81 293 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CMTM8Q8IZV2 173 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 BLIDQ8IZY5 108 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 GCNT2Q8N0V5 402 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 FTMTQ8N4E7 242 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 FAM71E2Q8N5Q1 922 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 EID2Q8N6I1 236 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF433Q8N7K0 673 aaPredicted RBP0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 BCORP1Q8N888 145 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 LINC01555Q8NAE3 123 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 C20orf203Q8NBC4 194 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 SUMF2Q8NBJ7 301 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CCDC148Q8NFR7 591 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 STXBP6Q8NFX7 210 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 OR52B4Q8NGK2 314 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 CCDC110Q8TBZ0 833 aa0.72□□□□□ -2.29
SMARCB1-209ENST00000635578 MARCH1Q8TCQ1 289 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms