RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 NKX2-1P43699 371 aaPredicted RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 SLCO1A2P46721 670 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 HTR5AP47898 357 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 CAV2P51636 162 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 CRYBA4P53673 196 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 OR2B8PP59922 312 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 ERVPABLB-1P60509 514 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 RPS15AP62244 130 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 MRPS6P82932 125 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 DLG1Q12959 904 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 MLLT11Q13015 90 aaPredicted RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 MYBPHQ13203 477 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 APOFQ13790 326 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 ITGA9Q13797 1035 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 TFDP1Q14186 410 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 MAD2L1BPQ15013 274 aaPredicted RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 IRF4Q15306 451 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 CTF1Q16619 201 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 LRRC36Q1X8D7 754 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 MS4A18Q3C1V0 323 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 PDZD11Q5EBL8 140 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 TPRG1LQ5T0D9 272 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 OGFRL1Q5TC84 451 aaPredicted RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 TMEM42Q69YG0 159 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 CYB5R2Q6BCY4 276 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 RTL6Q6ICC9 239 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 FAHD2BQ6P2I3 314 aaPredicted RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 PNCKQ6P2M8 343 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 CD200R1LQ6Q8B3 271 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 LCLAT1Q6UWP7 414 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 ENPP6Q6UWR7 440 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 CWC27Q6UX04 472 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 DPY19L2P2Q6ZN68 376 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 ZNF836Q6ZNA1 936 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 TMEM144Q7Z5S9 345 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 ANKRD37Q7Z713 158 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 RBM23Q86U06 439 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 CCDC71Q8IV32 467 aaPredicted RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 KIR2DL5AQ8N109 375 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 LGI3Q8N145 548 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 SLC39A11Q8N1S5 342 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 CPSF7Q8N684 471 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 IQCF1Q8N6M8 205 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 LRRC52Q8N7C0 313 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 OR1M1Q8NGA1 313 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 OR5L1Q8NGL2 311 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 OR51A7Q8NH64 312 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 KIR2DL5BQ8NHK3 375 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 HMGCLL1Q8TB92 370 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 RNASEH2CQ8TDP1 164 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 RASSF5Q8WWW0 418 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 BADQ92934 168 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 C18orf25Q96B23 403 aaPredicted RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 CREB3L1Q96BA8 519 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 APH1AQ96BI3 265 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 FLYWCH2Q96CP2 140 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 FAHD2AQ96GK7 314 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 CENPNQ96H22 339 aaPredicted RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 QKIQ96PU8 341 aaKnown RBP eCLIP2.55□□□□□ -28e-13■■■■□ 24.5
PSPC1-208ENST00000635562 CSF3RQ99062 836 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 RNF2Q99496 336 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 TSNAXQ99598 290 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 C12orf57Q99622 126 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 MEIS3Q99687 375 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 AGPAT1Q99943 283 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 NEURL2Q9BR09 285 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 C2orf88Q9BSF0 95 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 TRIM51Q9BSJ1 452 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 BEX2Q9BXY8 128 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 MRPS26Q9BYN8 205 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 PRRG4Q9BZD6 226 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 BARHL1Q9BZE3 327 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 TUBB1Q9H4B7 451 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 TMEM38AQ9H6F2 299 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 RHOFQ9HBH0 211 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 IFT46Q9NQC8 304 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 STARD5Q9NSY2 213 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 DCAF13Q9NV06 445 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 TMEM30AQ9NV96 361 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 FGFR1OP2Q9NVK5 253 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 PAK1IP1Q9NWT1 392 aaPredicted RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 IMPAD1Q9NX62 359 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 IL36GQ9NZH8 169 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 RCC2Q9P258 522 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 KCNG2Q9UJ96 466 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 MRTO4Q9UKD2 239 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 PILRAQ9UKJ1 303 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 PLEKHG1Q9ULL1 1385 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 PROCRQ9UNN8 238 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 SLC6A5Q9Y345 797 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 SAR1BQ9Y6B6 198 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 MTCH2Q9Y6C9 303 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 CHD5Q8TDI0 1954 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 WDR81Q562E7 1941 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 BICRAQ9NZM4 1560 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 UHRF1BP1Q6BDS2 1440 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 IGLV5-37A0A075B6J1 123 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 A0A0A6YYD5 115 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 NSG1A0A0A6YYJ2 146 aa2.54□□□□□ -2
PSPC1-208ENST00000635562 NPIPA5A0A0B4J1W7 369 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms