RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 BIDP55957 195 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 CORO6Q6QEF8 472 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 CBLN3Q6UW01 205 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.7□□□□□ -0.54
MSH6-215ENST00000622629 ZBTB8AQ96BR9 441 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 HRASLSQ9HDD0 168 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 KLF15Q9UIH9 416 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 HTR3BO95264 441 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 FGL1Q08830 312 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 TMEM176BQ3YBM2 270 aaPredicted RBP11.7□□□□□ -0.54
MSH6-215ENST00000622629 OR10K2Q6IF99 312 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 STAC2Q6ZMT1 411 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 DCXRQ7Z4W1 244 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 OR5D18Q8NGL1 313 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 HIST1H2AAQ96QV6 131 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 SELENOIQ9C0D9 397 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 FLRT3Q9NZU0 649 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 SUSD2Q9UGT4 822 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 BCAT2O15382 392 aaPredicted RBP11.7□□□□□ -0.54
MSH6-215ENST00000622629 ERGP11308 486 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 CD27P26842 260 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 RAD52P43351 418 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 ZNF136P52737 540 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 EIF5AP63241 154 aaKnown RBP11.7□□□□□ -0.54
MSH6-215ENST00000622629 FAM53BQ14153 422 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 SPIN3Q5JUX0 258 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 EIF5AL1Q6IS14 154 aaKnown RBP11.7□□□□□ -0.54
MSH6-215ENST00000622629 TMEM91Q6ZNR0 172 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 SPAG16Q8N0X2 631 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 ARIH2OSQ8N7S6 290 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 OR4D9Q8NGE8 314 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 HOXB13Q92826 284 aaPredicted RBP11.7□□□□□ -0.54
MSH6-215ENST00000622629 PNPLA2Q96AD5 504 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 C3orf49Q96BT1 292 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 KTI12Q96EK9 354 aaPredicted RBP11.7□□□□□ -0.54
MSH6-215ENST00000622629 PHB2Q99623 299 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 BHLHE40O14503 412 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 SEMA7AO75326 666 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 RPL27P61353 136 aaKnown RBP11.69□□□□□ -0.54
MSH6-215ENST00000622629 CSNK2A1P68400 391 aaPredicted RBP11.69□□□□□ -0.54
MSH6-215ENST00000622629 PSG6Q00889 435 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 C14orf28Q4W4Y0 310 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 CSNK2A3Q8NEV1 391 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 OR2G2Q8NGZ5 317 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 FAM174AQ8TBP5 190 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 FGGYQ96C11 551 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 LRRC61Q9BV99 259 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 SIRT4Q9Y6E7 314 aaPredicted RBP11.69□□□□□ -0.54
MSH6-215ENST00000622629 PCNTO95613 3336 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 G3V3Y1 287 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 GPANK1O95872 356 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 IFNGR1P15260 489 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 ZNF84P51523 738 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 ESCO2Q56NI9 601 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 SLC25A30Q5SVS4 291 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 GSG1LQ6UXU4 331 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 OR5H2Q8NGV7 314 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 DCBLD2Q96PD2 775 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 TSNAXQ99598 290 aaKnown RBP11.69□□□□□ -0.54
MSH6-215ENST00000622629 ZNF160Q9HCG1 818 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 S100A6P06703 90 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 S100GP29377 79 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 SNU13P55769 128 aaKnown RBP11.69□□□□□ -0.54
MSH6-215ENST00000622629 TIGD3Q6B0B8 471 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 TCTE3Q8IZS6 198 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 MICU1Q9BPX6 476 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 MCCC2Q9HCC0 563 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 PLEK2Q9NYT0 353 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 GLTPQ9NZD2 209 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 RHBDD3Q9Y3P4 386 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 ETV7Q9Y603 341 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 TSC2P49815 1807 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 PRICKLE3O43900 615 aaPredicted RBP11.69□□□□□ -0.54
MSH6-215ENST00000622629 SCRG1O75711 98 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 GK2Q14410 553 aaPredicted RBP11.69□□□□□ -0.54
MSH6-215ENST00000622629 STEAP2Q8NFT2 490 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 OR51T1Q8NGJ9 327 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 SMIM4Q8WVI0 70 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 SFXN2Q96NB2 322 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 OR6C1Q96RD1 312 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 MARVELD1Q9BSK0 173 aa11.69□□□□□ -0.54
MSH6-215ENST00000622629 COLQQ9Y215 455 aaPredicted RBP11.69□□□□□ -0.54
MSH6-215ENST00000622629 DVL2O14641 736 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 SNAPC5O75971 98 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 ZFAND5O76080 213 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 AKR7A3O95154 331 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 IGHA1P01876 353 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 DLSTP36957 453 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 CAPZA1P52907 286 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 TNK1Q13470 666 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 WDR88Q6ZMY6 472 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 SCN5AQ14524 2016 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 SULT1B1O43704 296 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 PDGFAP04085 211 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 CXCL12P48061 93 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 ZNF85Q03923 595 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 DLX2Q07687 328 aaPredicted RBP11.68□□□□□ -0.54
MSH6-215ENST00000622629 C17orf67Q0P5P2 114 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 RNLSQ5VYX0 342 aa11.68□□□□□ -0.54
MSH6-215ENST00000622629 Q6ZTK2 550 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms