RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 MAPK14Q16539 360 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 FAHD1Q6P587 224 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 DCDC5Q6ZRR9 648 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 LINC00299Q6ZSB3 139 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 C6orf120Q7Z4R8 191 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 TSEN54Q7Z6J9 526 aaKnown RBP6.8□□□□□ -1.32
CLK1-215ENST00000621181 GPAT4Q86UL3 456 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 ANKRD46Q86W74 232 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 ADGRG3Q86Y34 549 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 LINC01356Q8N9X3 169 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 POMGNT2Q8NAT1 580 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 PIK3C3Q8NEB9 887 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 FAM71CQ8NEG0 241 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 ZNF555Q8NEP9 628 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 BPIFB6Q8NFQ5 453 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 OR8J2Q8NGG1 315 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 CHPT1Q8WUD6 406 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 XAGE5Q8WWM1 108 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 COQ8BQ96D53 544 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 YIPF6Q96EC8 236 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 NRBF2Q96F24 287 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 SLC35G5Q96KT7 338 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 SLC38A2Q96QD8 506 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 BCL7BQ9BQE9 202 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 DUSP26Q9BV47 211 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 KATNB1Q9BVA0 655 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 FUNDC2Q9BWH2 189 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 SERHL2Q9H4I8 314 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 RMND5AQ9H871 391 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 OBP2BQ9NPH6 170 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 NDRG4Q9ULP0 352 aaKnown RBP6.8□□□□□ -1.32
CLK1-215ENST00000621181 MGAM2Q2M2H8 2515 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 PFDN1O60925 122 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 GABARAPO95166 117 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 TFPTP0C1Z6 253 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 EEF1B2P24534 225 aaKnown RBP6.79□□□□□ -1.32
CLK1-215ENST00000621181 GIFP27352 417 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 HTR3AP46098 478 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 KCNJ10P78508 379 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 EMX1Q04741 257 aaPredicted RBP6.79□□□□□ -1.32
CLK1-215ENST00000621181 EFNB3Q15768 340 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 VMACQ2NL98 169 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 PGS1Q32NB8 556 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 SYT6Q5T7P8 510 aaPredicted RBP6.79□□□□□ -1.32
CLK1-215ENST00000621181 OR4F3Q6IEY1 312 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 OR2T5Q6IEZ7 315 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 PAQR6Q6TCH4 344 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 VASH1Q7L8A9 365 aaPredicted RBP6.79□□□□□ -1.32
CLK1-215ENST00000621181 AAED1Q7RTV5 226 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 ZDHHC21Q8IVQ6 265 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 OR2T29Q8NH02 315 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 GIPC3Q8TF64 312 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 PMM1Q92871 262 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 ZMYND19Q96E35 227 aaPredicted RBP6.79□□□□□ -1.32
CLK1-215ENST00000621181 C7orf34Q96L11 122 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 ALKBH3Q96Q83 286 aaPredicted RBP6.79□□□□□ -1.32
CLK1-215ENST00000621181 PITX2Q99697 317 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 OR51I1Q9H343 314 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 PLK3Q9H4B4 646 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 METTL17Q9H7H0 456 aaPredicted RBP6.79□□□□□ -1.32
CLK1-215ENST00000621181 FBXO9Q9UK97 447 aaPredicted RBP6.79□□□□□ -1.32
CLK1-215ENST00000621181 BLOC1S6Q9UL45 172 aa6.79□□□□□ -1.32
CLK1-215ENST00000621181 TMED7-TICAM2A0A0A6YYA0 188 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 A0A0A6YYJ9 748 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 CLDN24A6NM45 220 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 VSTM5A8MXK1 200 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 ZNF587BE7ETH6 402 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 hCG_2039718K7EN88 272 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 RFXANKO14593 260 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 MRPS14O60783 128 aaKnown RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 LILRA1O75019 489 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 AGR2O95994 175 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 BCL10O95999 233 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 TACSTD2P09758 323 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 CECR9P0C854 216 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 OR12D1P0DN82 309 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 KDELR2P33947 212 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 POLR2HP52434 150 aaKnown RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 RAD23AP54725 363 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 NAAAQ02083 359 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 ZSWIM7Q19AV6 140 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 TBRG1Q3YBR2 411 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 TYW3Q6IPR3 259 aaKnown RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 TNFAIP8L2Q6P589 184 aaPredicted RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 ERICH5Q6P6B1 374 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 ANKRD16Q6P6B7 361 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 CBLL1Q75N03 491 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 HMGN2P46Q86SG4 172 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 ZNF554Q86TJ5 538 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 CLECL1Q8IZS7 167 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 ZCCHC24Q8N2G6 241 aaKnown RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 PARP8Q8N3A8 854 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 C3orf56Q8N813 242 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 CNIH3Q8TBE1 160 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 NEU4Q8WWR8 484 aaPredicted RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 OIT3Q8WWZ8 545 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 RAB8BQ92930 207 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 TMEM45BQ96B21 275 aa6.78□□□□□ -1.32
CLK1-215ENST00000621181 ZNF385AQ96PM9 386 aaKnown RBP6.78□□□□□ -1.32
CLK1-215ENST00000621181 DYNLRB1Q9NP97 96 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms