RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 SCN5AQ14524 2016 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 NOTCH4Q99466 2003 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 WDFY3Q8IZQ1 3526 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 PRAF2O60831 178 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 NGFRP08138 427 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 SRFP11831 508 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 EFNB2P52799 333 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 TNFRSF17Q02223 184 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 HHEXQ03014 270 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF658BQ4V348 819 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-216ENST00000620854 TMEM35AQ53FP2 167 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 METRNLQ641Q3 311 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF626Q68DY1 528 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 PWWP2BQ6NUJ5 590 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 KCTD18Q6PI47 426 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-216ENST00000620854 DNM1P34Q6PK57 102 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 PRR22Q8IZ63 422 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 CLRN3Q8NCR9 226 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 PXT1Q8NFP0 134 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 OR2AK2Q8NG84 335 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 OR4N2Q8NGD1 307 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 OR52E1Q8NGJ3 308 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 NR4A3Q92570 626 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 LRRC3BQ96PB8 259 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 ANKRD10Q9NXR5 420 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 NCDNQ9UBB6 729 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 NPTNQ9Y639 398 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 MTCL1Q9Y4B5 1905 aaKnown RBP6.35□□□□□ -1.39
NEDD9-216ENST00000620854 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 C17orf113A0A1B0GUU1 675 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 LINC01387J3KSC0 135 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 SSX5O60225 188 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 SC5DO75845 299 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 H2BFMP0C1H6 154 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 CBR1P16152 277 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 NR0B1P51843 470 aaKnown RBP6.35□□□□□ -1.39
NEDD9-216ENST00000620854 TRAM1Q15629 374 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 PHF19Q5T6S3 580 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 HACD4Q5VWC8 232 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 FIGLAQ6QHK4 219 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 PRSS41Q7RTY9 318 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF283Q8N7M2 679 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 ATOH1Q92858 354 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-216ENST00000620854 FAM46BQ96A09 425 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 GIMAP5Q96F15 307 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 WDR77Q9BQA1 342 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-216ENST00000620854 C7orf50Q9BRJ6 194 aaKnown RBP6.35□□□□□ -1.39
NEDD9-216ENST00000620854 SLC6A17Q9H1V8 727 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 WDR13Q9H1Z4 485 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 CYB5R1Q9UHQ9 305 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 ATPIF1Q9UII2 106 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 FOXJ3Q9UPW0 622 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 SIT1Q9Y3P8 196 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 ZDBF2Q9HCK1 2354 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 A0A1B0GWA3 101 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF98A6NK75 572 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 C2CD4DB7Z1M9 353 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 DNASE2O00115 360 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-216ENST00000620854 APOC1P02654 83 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 FGF2P09038 288 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 RAB3AP20336 220 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 GALP22466 123 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 RAG2P55895 527 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 ACTA2P62736 377 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 VAMP2P63027 116 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 ACTG2P63267 376 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 UBE2IP63279 158 aaKnown RBP6.34□□□□□ -1.39
NEDD9-216ENST00000620854 NFATC4Q14934 902 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 DCST2Q5T1A1 773 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 SHEQ5VZ18 495 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 TMEM225Q6GV28 225 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 CD163Q86VB7 1156 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 MCEMP1Q8IX19 187 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 CDH26Q8IXH8 852 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 OR5M9Q8NGP3 310 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 OR10Z1Q8NGY1 313 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 NPRL2Q8WTW4 380 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 ZDHHC12Q96GR4 267 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 TGM7Q96PF1 710 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 NKX6-2Q9C056 277 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-216ENST00000620854 EPHX3Q9H6B9 360 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 SDHAF3Q9NRP4 125 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 CES1P1Q9UKY3 287 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 REV3LO60673 3130 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 KIF26BQ2KJY2 2108 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 AHCTF1Q8WYP5 2266 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 ASXL3Q9C0F0 2248 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 TRAV1-2A0A0B4J238 106 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 ANKRD20A5PA0PJZ0 165 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 PRSS38A1L453 326 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 OR6C68A6NDL8 312 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 OTOL1A6NHN0 477 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-216ENST00000620854 PRR32B1ATL7 298 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 ACOT7O00154 380 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 NDUFB6O95139 128 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 NDUFB2O95178 105 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 F13BP05160 661 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 MAOBP27338 520 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 DPP4P27487 766 aa6.34□□□□□ -1.39
NEDD9-216ENST00000620854 CD38P28907 300 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms