RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 FOXRED1Q96CU9 486 aaPredicted RBP12.08□□□□□ -0.48
CYFIP1-211ENST00000619348 TLNRD1Q9H1K6 362 aa12.08□□□□□ -0.48
CYFIP1-211ENST00000619348 CHRDQ9H2X0 955 aa12.08□□□□□ -0.48
CYFIP1-211ENST00000619348 STEAP1Q9UHE8 339 aa12.08□□□□□ -0.48
CYFIP1-211ENST00000619348 KCNE5Q9UJ90 142 aa12.08□□□□□ -0.48
CYFIP1-211ENST00000619348 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.08□□□□□ -0.48
CYFIP1-211ENST00000619348 METTL21EPA6NDL7 271 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 CTDSPLO15194 276 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 SSX5O60225 188 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 TYRP1P17643 537 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 TAS2R19P59542 299 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 RUNX2Q13950 521 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 PRSS58Q8IYP2 241 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 ZNF101Q8IZC7 436 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 SFT2D1Q8WV19 159 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 GAL3ST4Q96RP7 486 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 ELL3Q9HB65 397 aaPredicted RBP12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 COLEC10Q9Y6Z7 277 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 TMEM272A0A1B0GTI8 110 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 OR6C76A6NM76 312 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 KLF4O43474 513 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 XRCC3O43542 346 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 AQP8O94778 261 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 SCGB1D2O95969 90 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 RENP00797 406 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 GP1BAP07359 652 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 CD80P33681 288 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 NPBWR1P48145 328 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 EEF1A1P68104 462 aaKnown RBP12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 PRAMEF8Q5VWM4 474 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 PRAMEF7Q5VXH5 474 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 LCN10Q6JVE6 187 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 ADAM5Q6NVV9 412 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 PHB2Q99623 299 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 WDR76Q9H967 626 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 RASL12Q9NYN1 266 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 RNF215Q9Y6U7 377 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 MAP1BP46821 2468 aaKnown RBP12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 LINC00587B1AMM8 73 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 J3QRE1 110 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 PMS2P2O95744 297 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 FABP1P07148 127 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 PPIAP62937 165 aaKnown RBP12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 MEP1BQ16820 701 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 C2orf27AQ580R0 203 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 ULK3Q6PHR2 472 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 FAM180AQ6UWF9 173 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 MCATQ8IVS2 390 aaKnown RBP12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 EID2Q8N6I1 236 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 OR6N1Q8NGY5 312 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 SLC22A8Q8TCC7 542 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 CMBLQ96DG6 245 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 ZCCHC4Q9H5U6 513 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 MSRAQ9UJ68 235 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 CSAG2Q9Y5P2 127 aa12.07□□□□□ -0.48
CYFIP1-211ENST00000619348 MED12Q93074 2177 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 SRPX2O60687 465 aaPredicted RBP12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 RDH16O75452 317 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 NGFRP08138 427 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 CALCBP10092 127 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 ZNF616Q08AN1 781 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 FAM174AQ8TBP5 190 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 NUDCD2Q8WVJ2 157 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 FGF13Q92913 245 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 TSACCQ96A04 125 aaPredicted RBP12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 VOPP1Q96AW1 172 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 SLC25A44Q96H78 314 aaPredicted RBP12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 SPACA7Q96KW9 195 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 DZANK1Q9NVP4 752 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 ZNF223Q9UK11 482 aaPredicted RBP12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 KLHDC2Q9Y2U9 406 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 CTAG2O75638 210 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 HTR3BO95264 441 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 PRH1P02810 166 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 TPT1P13693 172 aaKnown RBP12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 CPT2P23786 658 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 HOXA1P49639 335 aaPredicted RBP12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 FBXW4P57775 412 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 HFEQ30201 348 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 C11orf87Q6NUJ2 197 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 RBMS3Q6XE24 437 aaKnown RBP12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 ACOT7LQ6ZUV0 252 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 SLC2A12Q8TD20 617 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 ZNF681Q96N22 645 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 GFI1Q99684 422 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 RSRP1Q9BUV0 290 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 TMPRSS13Q9BYE2 586 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 CHMP1AQ9HD42 196 aaPredicted RBP12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 EXOSC3Q9NQT5 275 aaKnown RBP12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 FRRS1LQ9P0K9 344 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 MED6O75586 246 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 RPA2P15927 270 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 RAB6AP20340 208 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 CDKN2AP42771 156 aaKnown RBP12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 IRF4Q15306 451 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 MARCH3Q86UD3 253 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 NAA40Q86UY6 237 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 TEX19Q8NA77 164 aa12.06□□□□□ -0.48
CYFIP1-211ENST00000619348 METTL21AQ8WXB1 218 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms