RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 MYOZ1Q9NP98 299 aaPredicted RBP18.87■□□□□ 0.61
TRAF4-217ENST00000618771 SPAG4Q9NPE6 437 aa18.87■□□□□ 0.61
TRAF4-217ENST00000618771 TMEM129A0AVI4 362 aa18.86■□□□□ 0.61
TRAF4-217ENST00000618771 RNF212BA8MTL3 300 aa18.86■□□□□ 0.61
TRAF4-217ENST00000618771 MAKP20794 623 aa18.86■□□□□ 0.61
TRAF4-217ENST00000618771 ZNF133P52736 654 aaPredicted RBP18.86■□□□□ 0.61
TRAF4-217ENST00000618771 PRKCDQ05655 676 aa18.86■□□□□ 0.61
TRAF4-217ENST00000618771 TOP3AQ13472 1001 aaPredicted RBP18.86■□□□□ 0.61
TRAF4-217ENST00000618771 TAF11Q15544 211 aa18.86■□□□□ 0.61
TRAF4-217ENST00000618771 TMEM249Q2WGJ8 235 aa18.86■□□□□ 0.61
TRAF4-217ENST00000618771 SLC36A2Q495M3 483 aa18.86■□□□□ 0.61
TRAF4-217ENST00000618771 C10orf128Q5T292 105 aa18.86■□□□□ 0.61
TRAF4-217ENST00000618771 GKAP1Q5VSY0 366 aaPredicted RBP18.86■□□□□ 0.61
TRAF4-217ENST00000618771 TMEM53Q6P2H8 277 aa18.86■□□□□ 0.61
TRAF4-217ENST00000618771 MEX3DQ86XN8 651 aaKnown RBP18.86■□□□□ 0.61
TRAF4-217ENST00000618771 CDK20Q8IZL9 346 aa18.86■□□□□ 0.61
TRAF4-217ENST00000618771 ACOT11Q8WXI4 607 aaPredicted RBP18.86■□□□□ 0.61
TRAF4-217ENST00000618771 HDAC2Q92769 488 aaKnown RBP18.86■□□□□ 0.61
TRAF4-217ENST00000618771 MRPL24Q96A35 216 aaKnown RBP18.86■□□□□ 0.61
TRAF4-217ENST00000618771 RNF121Q9H920 327 aa18.86■□□□□ 0.61
TRAF4-217ENST00000618771 YAE1D1Q9NRH1 226 aa18.86■□□□□ 0.61
TRAF4-217ENST00000618771 RPS6KA6Q9UK32 745 aa18.86■□□□□ 0.61
TRAF4-217ENST00000618771 CUBNO60494 3623 aa18.86■□□□□ 0.61
TRAF4-217ENST00000618771 SH3PXD2BA1X283 911 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 GMNCA6NCL1 334 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 NDUFS8O00217 210 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 PRSS23O95084 383 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 ERCC1P07992 297 aaPredicted RBP18.85■□□□□ 0.61
TRAF4-217ENST00000618771 NR2C1P13056 603 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 USF1P22415 310 aaPredicted RBP18.85■□□□□ 0.61
TRAF4-217ENST00000618771 GLRXP35754 106 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 RPS23P62266 143 aaKnown RBP18.85■□□□□ 0.61
TRAF4-217ENST00000618771 CD47Q08722 323 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 CARTPTQ16568 116 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 MSMPQ1L6U9 139 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 ZNF730Q6ZMV8 503 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 SLC16A14Q7RTX9 510 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 CYP4Z1Q86W10 505 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 RNF113BQ8IZP6 322 aaKnown RBP18.85■□□□□ 0.61
TRAF4-217ENST00000618771 RBM15BQ8NDT2 890 aaKnown RBP18.85■□□□□ 0.61
TRAF4-217ENST00000618771 PIMREGQ9BSJ6 248 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 SMURF2Q9HAU4 748 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 ADA2Q9NZK5 511 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 SLC7A8Q9UHI5 535 aa18.85■□□□□ 0.61
TRAF4-217ENST00000618771 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.84■□□□□ 0.611e-10■■■■□ 22.1
TRAF4-217ENST00000618771 TRAV27A0A087WT01 109 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 LOC390937A0A1W2PQ73 354 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 EFCAB9A8MZ26 197 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 VWC2LB2RUY7 222 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 SLC2A10O95528 541 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 IGHMP01871 453 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 RPL27P61353 136 aaKnown RBP18.84■□□□□ 0.61
TRAF4-217ENST00000618771 VLDLRP98155 873 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 FMODQ06828 376 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 FXNQ16595 210 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 ANKDD1AQ495B1 522 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 OAFQ86UD1 273 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 IGFN1Q86VF2 1251 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 ZCCHC24Q8N2G6 241 aaKnown RBP18.84■□□□□ 0.61
TRAF4-217ENST00000618771 LRRC18Q8N456 261 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 LRRC75AQ8NAA5 344 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 SLC30A7Q8NEW0 376 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 OR51A7Q8NH64 312 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 NEU4Q8WWR8 484 aaPredicted RBP18.84■□□□□ 0.61
TRAF4-217ENST00000618771 NMD3Q96D46 503 aaKnown RBP18.84■□□□□ 0.61
TRAF4-217ENST00000618771 KCNK17Q96T54 332 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 ALG12Q9BV10 488 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 MRPL37Q9BZE1 423 aaKnown RBP18.84■□□□□ 0.61
TRAF4-217ENST00000618771 EGFL7Q9UHF1 273 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 ENPP4Q9Y6X5 453 aa18.84■□□□□ 0.61
TRAF4-217ENST00000618771 A0A087WUU8 490 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 MGRN1O60291 552 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 SLC9A3P48764 834 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 GYS2P54840 703 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 CTXN1P60606 82 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 GNGT1P63211 74 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 MRPS34P82930 218 aaKnown RBP18.83■□□□□ 0.6
TRAF4-217ENST00000618771 GLYATQ6IB77 296 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 TBPL2Q6SJ96 375 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 MBOAT2Q6ZWT7 520 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 OR13C2Q8NGS9 318 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 NSMAFQ92636 917 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 FOXN4Q96NZ1 517 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 C1orf198Q9H425 327 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 ANKRD19PQ9H560 264 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 NMNAT1Q9HAN9 279 aaPredicted RBP18.83■□□□□ 0.6
TRAF4-217ENST00000618771 CDH20Q9HBT6 801 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 UGT2A1Q9Y4X1 527 aa18.83■□□□□ 0.6
TRAF4-217ENST00000618771 IGKV1D-43A0A0B4J1Z2 117 aa18.82■□□□□ 0.6
TRAF4-217ENST00000618771 A8MV72 311 aaPredicted RBP18.82■□□□□ 0.6
TRAF4-217ENST00000618771 IGFBP1P08833 259 aaPredicted RBP18.82■□□□□ 0.6
TRAF4-217ENST00000618771 ADRA2AP08913 450 aa18.82■□□□□ 0.6
TRAF4-217ENST00000618771 CDAP32320 146 aa18.82■□□□□ 0.6
TRAF4-217ENST00000618771 NR4A2P43354 598 aa18.82■□□□□ 0.6
TRAF4-217ENST00000618771 GPR4P46093 362 aa18.82■□□□□ 0.6
TRAF4-217ENST00000618771 EVX1P49640 407 aa18.82■□□□□ 0.6
TRAF4-217ENST00000618771 PLP2Q04941 152 aa18.82■□□□□ 0.6
TRAF4-217ENST00000618771 FHL1Q13642 323 aa18.82■□□□□ 0.6
TRAF4-217ENST00000618771 GGTLC2Q14390 218 aa18.82■□□□□ 0.6
TRAF4-217ENST00000618771 FAM205BPQ63HN1 556 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms